Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ACIVIR_RS07425 Genome accession   NZ_CP173225
Coordinates   1438641..1439105 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain 262     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1433641..1444105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIVIR_RS07405 - 1434592..1435560 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  ACIVIR_RS07410 pdrM 1435714..1437075 (-) 1362 WP_000278537.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  ACIVIR_RS07415 - 1437086..1437346 (-) 261 WP_001105925.1 hypothetical protein -
  ACIVIR_RS07420 - 1437360..1438628 (-) 1269 WP_000924495.1 dihydroorotase -
  ACIVIR_RS07425 mutX 1438641..1439105 (-) 465 WP_001135768.1 8-oxo-dGTP diphosphatase Machinery gene
  ACIVIR_RS07430 - 1439115..1439768 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  ACIVIR_RS07435 - 1439904..1440506 (-) 603 WP_025172122.1 hypothetical protein -
  ACIVIR_RS07440 - 1440564..1441277 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  ACIVIR_RS07445 dhaM 1441736..1442116 (-) 381 WP_000443784.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  ACIVIR_RS07450 - 1442575..1443881 (+) 1307 Protein_1428 transposase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=957262 ACIVIR_RS07425 WP_001135768.1 1438641..1439105(-) (mutX) [Streptococcus pneumoniae strain 262]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=957262 ACIVIR_RS07425 WP_001135768.1 1438641..1439105(-) (mutX) [Streptococcus pneumoniae strain 262]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAATGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987