Detailed information NTG0957027

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: ACIQTD_RS06385
• Genome accession: NZ_CP173185
• Coordinates: 1332445..1333500 (-)
• Length: 351 a.a.
• NCBI ID: WP_341540677.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain MGEL24009
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1327445..1338500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIQTD_RS06360	-	1328368..1328694 (-)	327	WP_098403346.1	hypothetical protein	-
ACIQTD_RS06365	-	1328895..1329764 (-)	870	WP_098403347.1	ParA family protein	-
ACIQTD_RS06370	-	1329757..1330188 (-)	432	WP_404399056.1	hypothetical protein	-
ACIQTD_RS06375	-	1330439..1331230 (-)	792	WP_404399057.1	hypothetical protein	-
ACIQTD_RS06380	-	1332074..1332361 (-)	288	WP_015426413.1	hypothetical protein	-
ACIQTD_RS06385	xerS	1332445..1333500 (-)	1056	WP_341540677.1	tyrosine recombinase XerS	Machinery gene
ACIQTD_RS06390	-	1334378..1335307 (-)	930	WP_124137465.1	N(5)-(carboxyethyl)ornithine synthase	-
ACIQTD_RS06395	-	1335346..1336296 (-)	951	WP_043735961.1	magnesium transporter CorA family protein	-
ACIQTD_RS06400	-	1336422..1336973 (-)	552	WP_332529623.1	Asp23/Gls24 family envelope stress response protein	-
ACIQTD_RS06405	-	1336994..1337182 (-)	189	WP_015425997.1	DUF2273 domain-containing protein	-
ACIQTD_RS06410	amaP	1337192..1337752 (-)	561	WP_011835141.1	alkaline shock response membrane anchor protein AmaP	-
ACIQTD_RS06415	-	1337782..1338021 (-)	240	WP_015426469.1	GlsB/YeaQ/YmgE family stress response membrane protein	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 40617.42 Da
• Isoelectric Point: 9.7113

>NTDB_id=957027 ACIQTD_RS06385 WP_341540677.1 1332445..1333500(-) (xerS) [Lactococcus lactis subsp. lactis strain MGEL24009]
MSENHGYRYNVNKLMLEFPYYVNEFIQSKDTVPLSIASIYSYCLEFRKYLKWMSENNITNHANIKEITLKEMENVTKREL
EAFVLHERLRLESKCGSNTHTSALNRTIAAIKSLYNYLCEQTEDEDGNTYIIRNVSRLIHIRKKSETLHYRAAQLEGKLF
LGDETKSFLEFVEQDYEKSVSNRAKTSFKKNKKRDLAILSLFLSSGLRCAELVGINLNDLNLETGKVSVMRKEGKKDVVP
IAHFSHKYITDYYNARSSITTEIQALFITDYNQKIRKISNASINKLVAKYSEAYKIRVTPHTLRHTFATRLYNVSHSQVL
VSNQLGHSSTKPTELYTHIVSAEAKDALRKL

Nucleotide

• Length: 1056 bp

>NTDB_id=957027 ACIQTD_RS06385 WP_341540677.1 1332445..1333500(-) (xerS) [Lactococcus lactis subsp. lactis strain MGEL24009]
ATGTCAGAAAATCATGGTTATCGTTATAATGTAAATAAACTCATGCTTGAGTTTCCCTACTACGTCAATGAGTTTATCCA
GTCTAAGGACACTGTACCGCTGAGTATTGCCTCTATTTACTCTTACTGCCTAGAGTTCAGGAAATACTTAAAATGGATGA
GTGAAAATAACATAACGAACCATGCTAACATCAAAGAAATCACTTTGAAAGAAATGGAAAACGTAACGAAACGTGAGCTA
GAAGCCTTCGTACTTCACGAACGACTCCGTTTAGAATCAAAATGTGGCTCTAATACACATACATCAGCATTAAATCGAAC
CATTGCAGCGATTAAGAGTTTATATAATTATCTTTGTGAACAAACTGAGGATGAAGACGGAAATACATACATAATACGAA
ATGTTAGTCGTTTAATTCATATCCGAAAAAAAAGCGAAACCTTGCATTACCGTGCGGCTCAACTTGAAGGGAAACTCTTT
TTAGGTGATGAAACCAAATCCTTTTTAGAATTTGTTGAGCAAGACTATGAAAAGTCTGTCAGTAATCGTGCGAAAACAAG
TTTCAAAAAAAATAAAAAAAGAGATTTAGCCATACTAAGCCTCTTTTTATCTTCTGGATTACGCTGTGCGGAACTTGTAG
GGATCAATCTCAATGATTTAAACCTTGAAACTGGAAAAGTAAGTGTTATGCGAAAAGAAGGAAAGAAAGATGTTGTTCCA
ATTGCCCACTTTTCACACAAATATATAACTGATTATTATAATGCAAGAAGTAGCATAACCACAGAGATACAGGCCTTATT
CATCACAGATTACAACCAAAAAATAAGAAAAATATCAAATGCTTCGATAAATAAGCTCGTAGCGAAGTATTCAGAAGCCT
ATAAAATTCGAGTGACACCTCATACACTAAGGCATACATTCGCAACAAGACTTTATAATGTCAGTCACTCTCAAGTCCTT
GTCAGCAATCAACTAGGCCATTCCTCAACTAAGCCTACTGAGTTATATACCCACATTGTCAGTGCTGAAGCTAAAGATGC
TTTAAGAAAGTTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (185-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	45.272	99.43	0.45