Detailed information NTG0956909

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACIV1F_RS04220
• Genome accession: NZ_CP173176
• Coordinates: 848679..849761 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain SA0413Rev
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 843679..854761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIV1F_RS04200 (ACIV1F_000841)	-	844051..845121 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
ACIV1F_RS04205 (ACIV1F_000842)	-	845439..846494 (+)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
ACIV1F_RS04210 (ACIV1F_000843)	-	846664..847305 (-)	642	WP_000192947.1	YigZ family protein	-
ACIV1F_RS04215 (ACIV1F_000844)	fakB1	847449..848315 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
ACIV1F_RS04220 (ACIV1F_000845)	comFA	848679..849761 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
ACIV1F_RS04225 (ACIV1F_000846)	-	849754..850428 (+)	675	WP_024937096.1	ComF family protein	-
ACIV1F_RS04230 (ACIV1F_000847)	hpf	850489..851061 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACIV1F_RS04235 (ACIV1F_000848)	secA	851475..854006 (+)	2532	WP_024937095.1	preprotein translocase subunit SecA	-
ACIV1F_RS04240 (ACIV1F_000849)	-	854048..854152 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=956909 ACIV1F_RS04220 WP_001548033.1 848679..849761(+) (comFA) [Staphylococcus aureus strain SA0413Rev]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=956909 ACIV1F_RS04220 WP_001548033.1 848679..849761(+) (comFA) [Staphylococcus aureus strain SA0413Rev]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367