Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   UXQ75_RS10235 Genome accession   NZ_CP148992
Coordinates   2072744..2073460 (+) Length   238 a.a.
NCBI ID   WP_000688498.1    Uniprot ID   Q2VG52
Organism   Staphylococcus aureus strain BSN76     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2067744..2078460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ75_RS10205 (UXQ75_10205) - 2067961..2068587 (+) 627 WP_000522384.1 nitroreductase family protein -
  UXQ75_RS10210 (UXQ75_10210) - 2068948..2069733 (+) 786 WP_000867950.1 carbon-nitrogen family hydrolase -
  UXQ75_RS13875 hld 2070333..2070413 (-) 81 WP_000046022.1 delta-hemolysin -
  UXQ75_RS10220 (UXQ75_10220) - 2070703..2071266 (+) 564 WP_001105696.1 accessory gene regulator AgrB -
  UXQ75_RS10225 (UXQ75_10225) agrD 2071269..2071412 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  UXQ75_RS10230 (UXQ75_10230) agrC 2071442..2072725 (+) 1284 WP_042908960.1 quorum-sensing sensor histidine kinase AgrC -
  UXQ75_RS10235 (UXQ75_10235) agrA 2072744..2073460 (+) 717 WP_000688498.1 quorum-sensing response regulator AgrA Regulator
  UXQ75_RS10240 (UXQ75_10240) - 2073532..2073641 (+) 110 Protein_1980 hypothetical protein -
  UXQ75_RS10245 (UXQ75_10245) - 2073829..2074788 (-) 960 WP_001253291.1 carbohydrate kinase family protein -
  UXQ75_RS10250 (UXQ75_10250) - 2074785..2076269 (-) 1485 WP_000141411.1 sucrose-6-phosphate hydrolase -
  UXQ75_RS10255 (UXQ75_10255) - 2076418..2077368 (-) 951 WP_000790329.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27933.91 Da        Isoelectric Point: 6.0927

>NTDB_id=956535 UXQ75_RS10235 WP_000688498.1 2072744..2073460(+) (agrA) [Staphylococcus aureus strain BSN76]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSRDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=956535 UXQ75_RS10235 WP_000688498.1 2072744..2073460(+) (agrA) [Staphylococcus aureus strain BSN76]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGTTTACAATTAT
TATCAAGAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2VG52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996