Detailed information NTG0956055

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WG927_RS17425
• Genome accession: NZ_CP148896
• Coordinates: 3533160..3534323 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain XS142
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3528160..3539323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WG927_RS17395 (WG927_17355)	-	3528425..3528844 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
WG927_RS17400 (WG927_17360)	comFC	3528918..3529607 (-)	690	WP_199449054.1	ComF family protein	Machinery gene
WG927_RS17405 (WG927_17365)	-	3529613..3529897 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
WG927_RS17410 (WG927_17370)	comFA	3529955..3531340 (-)	1386	WP_029972824.1	DEAD/DEAH box helicase	Machinery gene
WG927_RS17415 (WG927_17375)	-	3531448..3532296 (-)	849	WP_003151387.1	DegV family protein	-
WG927_RS17420 (WG927_17380)	degU	3532394..3533083 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
WG927_RS17425 (WG927_17385)	degS	3533160..3534323 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
WG927_RS17430 (WG927_17390)	-	3534546..3535193 (+)	648	WP_007614107.1	YigZ family protein	-
WG927_RS17435 (WG927_17395)	-	3535198..3536412 (+)	1215	WP_014419013.1	LCP family protein	-
WG927_RS17440 (WG927_17400)	-	3536511..3537587 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
WG927_RS17445 (WG927_17405)	tuaH	3537720..3538916 (-)	1197	WP_029972825.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=956055 WG927_RS17425 WP_007407484.1 3533160..3534323(-) (degS) [Bacillus velezensis strain XS142]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=956055 WG927_RS17425 WP_007407484.1 3533160..3534323(-) (degS) [Bacillus velezensis strain XS142]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTGGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951