Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WG927_RS06200 Genome accession   NZ_CP148896
Coordinates   1181155..1181346 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain XS142     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176155..1186346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WG927_RS06170 (WG927_06150) argF 1177006..1177977 (+) 972 WP_029973149.1 ornithine carbamoyltransferase -
  WG927_RS06175 (WG927_06155) - 1178053..1178232 (+) 180 WP_003155070.1 YjzC family protein -
  WG927_RS06180 (WG927_06160) - 1178269..1178454 (-) 186 WP_007409129.1 YjzD family protein -
  WG927_RS06185 (WG927_06165) - 1178715..1179449 (+) 735 WP_022553564.1 hypothetical protein -
  WG927_RS06190 (WG927_06170) - 1179532..1180098 (+) 567 WP_017417444.1 hypothetical protein -
  WG927_RS06195 (WG927_06175) med 1180189..1181142 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  WG927_RS06200 (WG927_06180) comZ 1181155..1181346 (+) 192 WP_003155061.1 ComZ family protein Regulator
  WG927_RS06205 (WG927_06185) - 1181375..1181593 (-) 219 WP_007409123.1 hypothetical protein -
  WG927_RS06210 (WG927_06190) - 1181760..1182698 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  WG927_RS06215 (WG927_06195) fabF 1182721..1183959 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  WG927_RS06220 (WG927_06200) - 1184043..1184828 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  WG927_RS06225 (WG927_06205) - 1185002..1185988 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=956010 WG927_RS06200 WP_003155061.1 1181155..1181346(+) (comZ) [Bacillus velezensis strain XS142]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=956010 WG927_RS06200 WP_003155061.1 1181155..1181346(+) (comZ) [Bacillus velezensis strain XS142]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794