Detailed information NTG0955870

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACIIQ4_RS22510
• Genome accession: NZ_CP172867
• Coordinates: 4605133..4606158 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 35
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4600133..4611158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIIQ4_RS22490 (ACIIQ4_22490)	metJ	4601194..4601511 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACIIQ4_RS22495 (ACIIQ4_22495)	yiiX	4601695..4602303 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACIIQ4_RS22500 (ACIIQ4_22500)	rpmE	4602364..4602576 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACIIQ4_RS22505 (ACIIQ4_22505)	priA	4602779..4604977 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACIIQ4_RS22510 (ACIIQ4_22510)	cytR	4605133..4606158 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACIIQ4_RS22515 (ACIIQ4_22515)	ftsN	4606250..4607209 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACIIQ4_RS22520 (ACIIQ4_22520)	hslV	4607302..4607832 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACIIQ4_RS22525 (ACIIQ4_22525)	hslU	4607842..4609173 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACIIQ4_RS22530 (ACIIQ4_22530)	menA	4609240..4610166 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACIIQ4_RS22535 (ACIIQ4_22535)	rraA	4610259..4610744 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACIIQ4_RS22540 (ACIIQ4_22540)	zapB	4610829..4611074 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=955870 ACIIQ4_RS22510 WP_000644904.1 4605133..4606158(+) (cytR) [Escherichia coli strain 35]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=955870 ACIIQ4_RS22510 WP_000644904.1 4605133..4606158(+) (cytR) [Escherichia coli strain 35]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628