Detailed information NTG0955483

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: WHX56_RS30175
• Genome accession: NZ_CP148753
• Coordinates: 6480901..6482193 (-)
• Length: 430 a.a.
• NCBI ID: WP_338879826.1
• Uniprot ID: -
• Organism: Achromobacter veterisilvae strain AB1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6475901..6487193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHX56_RS30170 (WHX56_30170)	-	6478959..6480617 (+)	1659	WP_129243281.1	CYTH and CHAD domain-containing protein	-
WHX56_RS30175 (WHX56_30175)	pilA	6480901..6482193 (-)	1293	WP_338879826.1	signal recognition particle-docking protein FtsY	Machinery gene
WHX56_RS30180 (WHX56_30180)	rsmD	6482192..6482758 (+)	567	WP_129245414.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WHX56_RS30185 (WHX56_30185)	coaD	6482817..6483320 (+)	504	WP_043546238.1	pantetheine-phosphate adenylyltransferase	-
WHX56_RS30190 (WHX56_30190)	-	6483441..6483692 (+)	252	WP_129245412.1	YfhL family 4Fe-4S dicluster ferredoxin	-
WHX56_RS30195 (WHX56_30195)	-	6483689..6484912 (+)	1224	WP_165360314.1	benzoate/H(+) symporter BenE family transporter	-
WHX56_RS30200 (WHX56_30200)	-	6484915..6485301 (-)	387	WP_338879827.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 44258.84 Da
• Isoelectric Point: 5.1854

>NTDB_id=955483 WHX56_RS30175 WP_338879826.1 6480901..6482193(-) (pilA) [Achromobacter veterisilvae strain AB1]
MFSRFFKKKTPPPAAPVQPAPPPEAVDAVPAPAEPADAPVIPAPPPPPQPEALVPAPAPAEPPAEPAAAPAATPVSAPAP
APGPVREPEPAPAAAAAPVPAPAPAAVPAAPPAPEPEPEPEPAEAPRKASWLARLKQGLSRTGQSIGGIFVGVKVDENLF
EELESALIMADAGLEATEKLLTALRARVKKERIEDAAQVKTALRQLLADHLRPLERAFDLQRKQPLVVMIAGVNGAGKTT
SIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSRNNVTVISQDGGDPAAVAFDAVNAGRARGVGVVMVDTAGRLPT
QLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRP
IPVYWIGVGESLEDLQPFVADEFAGALLAE

Nucleotide

• Length: 1293 bp

>NTDB_id=955483 WHX56_RS30175 WP_338879826.1 6480901..6482193(-) (pilA) [Achromobacter veterisilvae strain AB1]
ATGTTCAGCCGCTTCTTCAAGAAAAAAACCCCTCCGCCCGCCGCGCCGGTCCAGCCCGCGCCGCCGCCGGAGGCAGTAGA
CGCCGTCCCCGCGCCGGCGGAACCCGCCGACGCTCCGGTCATTCCCGCTCCGCCGCCACCGCCCCAGCCCGAGGCGCTTG
TGCCGGCCCCGGCCCCGGCCGAACCGCCCGCCGAGCCGGCCGCGGCCCCGGCGGCAACGCCTGTTTCCGCGCCCGCTCCG
GCCCCCGGCCCGGTCCGCGAGCCGGAGCCCGCGCCGGCTGCCGCCGCGGCGCCCGTTCCGGCTCCCGCGCCGGCCGCCGT
TCCCGCGGCGCCGCCGGCTCCCGAGCCCGAGCCCGAGCCCGAGCCCGCCGAGGCGCCCAGGAAGGCGTCCTGGCTGGCAC
GGCTGAAACAGGGCCTGTCGCGCACTGGACAAAGCATTGGCGGCATCTTCGTCGGCGTCAAGGTCGACGAAAACCTGTTC
GAGGAGCTCGAATCGGCGCTCATTATGGCCGATGCGGGCCTGGAGGCCACCGAGAAGCTCCTGACCGCGCTGCGCGCGAG
GGTGAAGAAGGAACGCATCGAGGACGCGGCCCAGGTGAAGACGGCCCTGCGCCAATTGCTGGCCGACCACCTGCGTCCGC
TGGAGCGCGCGTTCGACCTCCAGCGCAAGCAGCCGCTGGTCGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACCACC
TCCATCGGCAAGCTGGCGCACACGTTCCAGCGCCAGGGGGCCAGCGTGCTGCTGGCGGCGGGCGATACCTTCCGTGCCGC
CGCCCGCGAGCAGCTCATCGAATGGGGCAGCCGCAACAACGTCACGGTCATCTCGCAGGATGGCGGCGATCCGGCGGCGG
TGGCGTTCGACGCCGTCAATGCGGGCCGCGCGCGCGGCGTGGGCGTGGTGATGGTGGATACCGCCGGCCGCCTGCCGACG
CAGTTGCACCTGATGGAAGAACTGAAGAAAATCCGCCGCGTCATCGGCAAGGCGGATGCCGCGGCGCCTCACGAGGTGCT
GCTGGTGGTCGACGGCAATACCGGGCAGAACGCCCTGGCGCAGATCCGCGCCTTCGACGCGGCCATCACCCTGACCGGCC
TGGTCGTGACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCCGCGGTGGCCGCGGGCAGCCAGGGCGTGCGTCCG
ATCCCGGTGTATTGGATCGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCGTTCGTGGCGGATGAGTTCGCCGGGGCGTT
GTTGGCGGAGTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (226-428)

• SRP54-type protein, helical bundle domain (SRP54_N) (144-205)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.064	100	0.491