Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WHX55_RS29110 Genome accession   NZ_CP148752
Coordinates   6376991..6377395 (-) Length   134 a.a.
NCBI ID   WP_150725063.1    Uniprot ID   A0A8H2RU43
Organism   Pseudomonas fluorescens strain AB1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6371991..6382395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHX55_RS29095 (WHX55_29065) - 6373789..6375849 (-) 2061 WP_150725064.1 methyl-accepting chemotaxis protein -
  WHX55_RS29100 (WHX55_29070) - 6376018..6376557 (-) 540 WP_046039266.1 chemotaxis protein CheW -
  WHX55_RS29105 (WHX55_29075) pilH 6376568..6376933 (-) 366 WP_101209186.1 twitching motility response regulator PilH -
  WHX55_RS29110 (WHX55_29080) pilG 6376991..6377395 (-) 405 WP_150725063.1 twitching motility response regulator PilG Regulator
  WHX55_RS29115 (WHX55_29085) gshB 6377736..6378689 (+) 954 WP_057712924.1 glutathione synthase -
  WHX55_RS29120 (WHX55_29090) - 6378754..6379653 (+) 900 WP_150755104.1 energy transducer TonB -
  WHX55_RS29125 (WHX55_29095) - 6379834..6380406 (+) 573 WP_057712922.1 YqgE/AlgH family protein -
  WHX55_RS29130 (WHX55_29100) ruvX 6380406..6380843 (+) 438 WP_103395762.1 Holliday junction resolvase RuvX -
  WHX55_RS29135 (WHX55_29105) pyrR 6380923..6381426 (+) 504 WP_223456707.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14643.10 Da        Isoelectric Point: 7.2444

>NTDB_id=955460 WHX55_RS29110 WP_150725063.1 6376991..6377395(-) (pilG) [Pseudomonas fluorescens strain AB1]
MERHPSALKVMVIDDSKTIRRTAETLLKNVGCEVITAVDGFDALAKIVDNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=955460 WHX55_RS29110 WP_150725063.1 6376991..6377395(-) (pilG) [Pseudomonas fluorescens strain AB1]
ATGGAACGGCACCCCAGCGCCTTGAAGGTCATGGTAATCGACGATTCGAAGACGATCCGTCGCACCGCCGAAACGCTGCT
CAAGAACGTGGGTTGTGAGGTCATCACGGCCGTCGACGGTTTTGATGCCCTGGCCAAGATTGTCGACAACCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCTCTGATCAAGAACAACAGTGCGTTCAAG
TCCACGCCGGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAACCTTTCAGCAAGGAAGAATTGCTTGATGCGATCCAGGCCCATGTTCCTGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701