Detailed information NTG0954352

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACIA66_RS19700
• Genome accession: NZ_CP172819
• Coordinates: 4027664..4028689 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain BS-04
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4022664..4033689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIA66_RS19670	zapB	4022748..4022993 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACIA66_RS19675	rraA	4023078..4023563 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACIA66_RS19680	menA	4023656..4024582 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACIA66_RS19685	hslU	4024649..4025980 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACIA66_RS19690	hslV	4025990..4026520 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACIA66_RS19695	ftsN	4026613..4027572 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACIA66_RS19700	cytR	4027664..4028689 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACIA66_RS19705	priA	4028845..4031043 (-)	2199	WP_053264640.1	primosomal protein N'	Machinery gene
ACIA66_RS19710	rpmE	4031246..4031458 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACIA66_RS19715	yiiX	4031522..4032130 (-)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
ACIA66_RS19720	metJ	4032190..4032507 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=954352 ACIA66_RS19700 WP_000644904.1 4027664..4028689(-) (cytR) [Escherichia coli strain BS-04]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=954352 ACIA66_RS19700 WP_000644904.1 4027664..4028689(-) (cytR) [Escherichia coli strain BS-04]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628