Detailed information NTG0954276

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACIA68_RS19750
• Genome accession: NZ_CP172818
• Coordinates: 4023444..4024469 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HS-02
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4018444..4029469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIA68_RS19720	zapB	4018528..4018773 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACIA68_RS19725	rraA	4018858..4019343 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACIA68_RS19730	menA	4019436..4020362 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACIA68_RS19735	hslU	4020429..4021760 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACIA68_RS19740	hslV	4021770..4022300 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACIA68_RS19745	ftsN	4022393..4023352 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACIA68_RS19750	cytR	4023444..4024469 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACIA68_RS19755	priA	4024625..4026823 (-)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
ACIA68_RS19760	rpmE	4027026..4027238 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACIA68_RS19765	yiiX	4027300..4027908 (-)	609	WP_022646382.1	YiiX family permuted papain-like enzyme	-
ACIA68_RS19770	metJ	4027968..4028285 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=954276 ACIA68_RS19750 WP_000644904.1 4023444..4024469(-) (cytR) [Escherichia coli strain HS-02]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=954276 ACIA68_RS19750 WP_000644904.1 4023444..4024469(-) (cytR) [Escherichia coli strain HS-02]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628