Detailed information NTG0954119

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACIA67_RS19450
• Genome accession: NZ_CP172816
• Coordinates: 3988605..3989630 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain BS-01
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3983605..3994630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIA67_RS19420	zapB	3983689..3983934 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACIA67_RS19425	rraA	3984019..3984504 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACIA67_RS19430	menA	3984597..3985523 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACIA67_RS19435	hslU	3985590..3986921 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACIA67_RS19440	hslV	3986931..3987461 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACIA67_RS19445	ftsN	3987554..3988513 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACIA67_RS19450	cytR	3988605..3989630 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACIA67_RS19455	priA	3989786..3991984 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACIA67_RS19460	rpmE	3992187..3992399 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACIA67_RS19465	yiiX	3992463..3993071 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACIA67_RS19470	metJ	3993255..3993572 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=954119 ACIA67_RS19450 WP_000644904.1 3988605..3989630(-) (cytR) [Escherichia coli strain BS-01]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=954119 ACIA67_RS19450 WP_000644904.1 3988605..3989630(-) (cytR) [Escherichia coli strain BS-01]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628