Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACGH7X_RS12580 Genome accession   NZ_CP172448
Coordinates   2752229..2753962 (+) Length   577 a.a.
NCBI ID   WP_399884699.1    Uniprot ID   -
Organism   Streptomyces sp. BBFR51     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2747229..2758962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGH7X_RS12540 (ACGH7X_12540) - 2747574..2748278 (+) 705 WP_399884691.1 ANTAR domain-containing protein -
  ACGH7X_RS12545 (ACGH7X_12545) - 2748357..2748503 (+) 147 WP_399884693.1 hypothetical protein -
  ACGH7X_RS12550 (ACGH7X_12550) - 2748598..2749491 (-) 894 WP_399884695.1 lysostaphin resistance A-like protein -
  ACGH7X_RS12570 (ACGH7X_12570) - 2750260..2750565 (+) 306 WP_217166718.1 YtxH domain-containing protein -
  ACGH7X_RS12575 (ACGH7X_12575) - 2750632..2752086 (+) 1455 WP_399884697.1 FGGY-family carbohydrate kinase -
  ACGH7X_RS12580 (ACGH7X_12580) rcrP 2752229..2753962 (+) 1734 WP_399884699.1 ABC transporter ATP-binding protein Regulator
  ACGH7X_RS12585 (ACGH7X_12585) rcrQ 2753962..2755890 (+) 1929 WP_399884702.1 ABC transporter ATP-binding protein Regulator
  ACGH7X_RS12590 (ACGH7X_12590) - 2756013..2757277 (-) 1265 Protein_2497 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62576.88 Da        Isoelectric Point: 6.9037

>NTDB_id=953987 ACGH7X_RS12580 WP_399884699.1 2752229..2753962(+) (rcrP) [Streptomyces sp. BBFR51]
MLIRLLRAYLRPYKKPIALLVALQFLQTCASLYLPTLNAHIIDEGVVKGDSGYILSYGAVMIGISLAQVVCNIGAVYYGA
RTAAALGRDVRGAVFDRVQSFSAREVGDFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVMALGLDVPLSGV
LVGVVPVLAVCVTLIVRKLRPLFRAMQVRLDTVNRVLREQITGNRVIRAFVRDEYEQQRFRKANADLTEVALGTGNLLAL
MFPVVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTESSVVP
PVTPVTQLRRHGHLEIRGAGFRYPGAEEPVLRHIELVAKPGETTAVIGSTGSGKSTLLGLVPRLFDATDGQVLVDGVDVR
TVDPKTLAKVVSLVPQKPYLFAGTVATNLRYGNPDATDEELWHALKVAQAKDFVSELEGGLDAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAELGRETAEATVVIVAQRVATIRDADRIIVLDEGRVVGVGRHHELMTDN
VTYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=953987 ACGH7X_RS12580 WP_399884699.1 2752229..2753962(+) (rcrP) [Streptomyces sp. BBFR51]
GTGCTCATACGACTCCTGCGGGCCTATCTCAGGCCCTACAAGAAACCCATCGCCCTGCTGGTGGCGCTGCAGTTCCTGCA
GACCTGCGCCTCCCTCTACCTGCCGACCCTGAACGCCCACATCATCGACGAGGGCGTGGTGAAGGGTGACTCGGGCTACA
TCCTGAGCTACGGCGCCGTGATGATCGGCATCTCGCTGGCCCAGGTGGTGTGCAACATCGGGGCCGTCTACTACGGCGCG
CGCACCGCGGCCGCCCTCGGCCGGGACGTGCGGGGTGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGCGAGGTCGG
CGACTTCGGCGCGCCCTCGCTGATCACCCGGACGACCAACGACGTGCAGCAGGTCCAGATGCTGGCCCTGATGACGTTCA
CGCTGATGGTGTCGGCGCCGATCATGTGCGTGGGCGGCATCGTGATGGCGCTCGGTCTGGACGTTCCGCTGTCCGGCGTG
CTGGTCGGGGTCGTGCCGGTGCTGGCGGTCTGCGTGACGCTGATCGTGCGGAAGCTGCGCCCGCTGTTCCGGGCCATGCA
GGTACGTCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTCATCCGCGCCTTCGTGCGCGACG
AGTACGAGCAGCAGCGCTTCCGGAAGGCCAACGCCGACCTCACCGAGGTGGCGCTGGGCACCGGCAACCTGCTGGCGCTG
ATGTTCCCGGTGGTCATGACGGTGGTGAACCTGTCGTCGATCGCGGTGGTGTGGTTCGGCGCCCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTATCTGATGCAGATCGTCATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTCCTGGGGACCGAGAGCAGCGTGGTGCCC
CCGGTGACGCCGGTCACGCAGCTGCGCCGGCACGGGCATCTGGAGATCCGGGGGGCGGGCTTCCGCTACCCCGGTGCGGA
GGAGCCGGTGCTCCGGCACATCGAACTGGTGGCCAAGCCGGGCGAGACGACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCGACCCTGCTGGGGCTGGTCCCGCGGCTCTTCGACGCCACCGACGGCCAGGTCCTGGTCGACGGGGTGGACGTGCGG
ACCGTGGACCCGAAGACGCTGGCCAAGGTCGTGAGCCTGGTCCCGCAGAAGCCGTATCTCTTCGCGGGGACCGTCGCGAC
CAATCTGCGCTACGGCAATCCGGACGCCACGGACGAGGAGCTGTGGCACGCGCTGAAGGTGGCACAGGCCAAGGACTTCG
TCTCGGAGCTGGAGGGCGGCCTCGACGCGCCGATCTCGCAGGGCGGCACGAACGTGTCGGGTGGCCAGCGGCAGCGGCTC
GCCATCGCGCGGACGCTGGTCCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCCCTGGACTACGCCACCGA
CGCGGCGCTGCGGGCCGAGCTGGGCCGGGAGACCGCCGAGGCGACGGTGGTGATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCGGACCGGATCATCGTGCTGGACGAGGGGCGGGTGGTCGGCGTGGGCCGGCACCACGAGCTGATGACGGACAAC
GTGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(19-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.721

97.574

0.378