Detailed information NTG0953874

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACGH52_RS03470
• Genome accession: NZ_CP172447
• Coordinates: 819471..820484 (+)
• Length: 337 a.a.
• NCBI ID: WP_076977849.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR25
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 814471..825484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH52_RS03455 (ACGH52_03455)	-	815789..816712 (-)	924	WP_076977850.1	carbohydrate ABC transporter permease	-
ACGH52_RS03460 (ACGH52_03460)	-	816725..817717 (-)	993	WP_059298785.1	carbohydrate ABC transporter permease	-
ACGH52_RS03465 (ACGH52_03465)	-	817823..819133 (-)	1311	WP_059298786.1	ABC transporter substrate-binding protein	-
ACGH52_RS03470 (ACGH52_03470)	cytR	819471..820484 (+)	1014	WP_076977849.1	LacI family DNA-binding transcriptional regulator	Regulator
ACGH52_RS03475 (ACGH52_03475)	-	820534..820929 (-)	396	WP_107487908.1	hypothetical protein	-
ACGH52_RS03480 (ACGH52_03480)	-	820978..821199 (-)	222	WP_399937485.1	hypothetical protein	-
ACGH52_RS03485 (ACGH52_03485)	-	821375..822337 (-)	963	WP_399937488.1	zinc-binding dehydrogenase	-
ACGH52_RS03490 (ACGH52_03490)	-	822445..823062 (+)	618	WP_171987548.1	TetR/AcrR family transcriptional regulator	-
ACGH52_RS03495 (ACGH52_03495)	-	823128..823331 (+)	204	WP_059298791.1	hypothetical protein	-
ACGH52_RS03500 (ACGH52_03500)	-	823499..824353 (+)	855	WP_399937494.1	glycerophosphodiester phosphodiesterase	-
ACGH52_RS03505 (ACGH52_03505)	-	824477..824821 (+)	345	WP_059298793.1	hypothetical protein	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36019.08 Da
• Isoelectric Point: 7.4760

>NTDB_id=953874 ACGH52_RS03470 WP_076977849.1 819471..820484(+) (cytR) [Streptomyces sp. BBFR25]
MTGNRRPTIKTVAARAGVGRTTVSRVVNGSELVSADARERVLAAIKELNYVPNSVARGLVTNRTNAVALVIPESESRLGS
EPFFAALIRGVSGALAVSRTQLQLMLVRDQAERDQLTESVATRRVDGVLLVSVHSEDRLPGMLEEMGLPTVLAGRRDAGE
RLSYVNSDNAGGAAAAVRHLLGGGRRRVATITGPLDMDVGRSRLAGWRAAHEEAGVPTPELLVEAGDFTEEGGANAMRLL
LERAPDLDAVFAASDLMAVGALAELRRLKRQVPGDVAVVGFEDSVLARHTNPPLTTVRQPVEELGRTMARILTDITQHGA
PRQQMTLPTELVVRESS

Nucleotide

• Length: 1014 bp

>NTDB_id=953874 ACGH52_RS03470 WP_076977849.1 819471..820484(+) (cytR) [Streptomyces sp. BBFR25]
ATGACCGGCAACCGCCGTCCAACGATCAAAACGGTCGCCGCCCGCGCCGGCGTGGGCCGCACCACGGTCTCCCGTGTCGT
CAACGGCTCGGAGCTGGTCAGTGCCGATGCCCGGGAGAGGGTCCTTGCGGCGATCAAGGAACTGAACTACGTTCCCAACT
CGGTCGCCCGCGGCCTGGTCACCAACCGCACCAACGCCGTTGCCCTGGTGATCCCGGAGTCGGAGAGCCGGCTCGGCTCG
GAGCCGTTCTTCGCCGCGCTCATCCGCGGTGTCAGCGGCGCCCTGGCCGTCAGCCGCACCCAGTTGCAGCTGATGCTCGT
CCGCGACCAGGCCGAGCGGGACCAGCTGACCGAGTCGGTCGCGACCCGCCGGGTGGACGGCGTGCTGCTGGTCTCCGTGC
ACTCCGAGGACCGGCTGCCGGGCATGCTGGAGGAGATGGGCCTGCCCACGGTGCTGGCCGGCCGCCGCGACGCGGGCGAG
CGGCTGAGCTACGTCAACTCCGACAACGCCGGCGGGGCGGCCGCCGCCGTGCGGCATCTGCTGGGCGGCGGACGGCGCCG
GGTCGCCACCATCACCGGACCGCTGGACATGGACGTCGGCCGCAGCAGGCTCGCCGGCTGGCGCGCCGCGCATGAGGAGG
CGGGGGTGCCTACGCCGGAACTCCTCGTCGAGGCGGGTGACTTCACCGAGGAGGGCGGTGCGAACGCCATGCGTTTGCTT
CTTGAACGCGCCCCCGACCTGGACGCCGTCTTCGCCGCGTCCGACCTGATGGCGGTCGGCGCCCTGGCCGAACTGCGCCG
GCTGAAGCGCCAGGTTCCGGGGGATGTGGCCGTCGTCGGTTTCGAGGACTCCGTCCTGGCCCGCCACACCAACCCGCCGC
TGACGACGGTGCGTCAGCCGGTGGAGGAACTGGGCCGGACCATGGCCCGTATCCTCACCGACATCACGCAGCACGGCGCG
CCCCGGCAGCAGATGACGCTGCCGACGGAGCTGGTGGTGCGCGAGTCGTCGTAG

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.777	100	0.362