Detailed information NTG0953775

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACHGMI_RS23125
• Genome accession: NZ_CP172417
• Coordinates: 4232821..4233954 (-)
• Length: 377 a.a.
• NCBI ID: WP_017696016.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AKPS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4227821..4238954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHGMI_RS23100	urtC	4228443..4229513 (-)	1071	WP_017696019.1	urea ABC transporter permease subunit UrtC	-
ACHGMI_RS23105	urtB	4229525..4230427 (-)	903	WP_017696018.1	urea ABC transporter permease subunit UrtB	-
ACHGMI_RS23110	urtA	4230460..4231716 (-)	1257	WP_017696017.1	urea ABC transporter substrate-binding protein	-
ACHGMI_RS23115	csbD	4231924..4232112 (-)	189	WP_014481173.1	stress response protein CsbD	-
ACHGMI_RS23120	-	4232186..4232665 (-)	480	WP_026113664.1	hypothetical protein	-
ACHGMI_RS23125	rapC	4232821..4233954 (-)	1134	WP_017696016.1	response regulator aspartate phosphatase RapB	Regulator
ACHGMI_RS23130	moaA	4234146..4235171 (-)	1026	WP_015483814.1	GTP 3',8-cyclase MoaA	-
ACHGMI_RS23135	fdhD	4235187..4235975 (-)	789	WP_014481178.1	formate dehydrogenase accessory sulfurtransferase FdhD	-
ACHGMI_RS23140	-	4236209..4236370 (-)	162	WP_003227706.1	hypothetical protein	-
ACHGMI_RS23145	-	4236465..4237139 (-)	675	WP_017696015.1	vWA domain-containing protein	-
ACHGMI_RS23150	-	4237192..4237332 (-)	141	WP_014481180.1	hypothetical protein	-
ACHGMI_RS23155	-	4237463..4238008 (-)	546	Protein_4510	vWA domain-containing protein	-
ACHGMI_RS23160	-	4238051..4238893 (-)	843	Protein_4511	IS3 family transposase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 45032.17 Da
• Isoelectric Point: 4.7546

>NTDB_id=953775 ACHGMI_RS23125 WP_017696016.1 4232821..4233954(-) (rapC) [Bacillus subtilis strain AKPS2]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALTVFEDYQLEQLPKALFSLTRVLFKKQDSEAAMRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLDMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQKNDCLYEV

Nucleotide

• Length: 1134 bp

>NTDB_id=953775 ACHGMI_RS23125 WP_017696016.1 4232821..4233954(-) (rapC) [Bacillus subtilis strain AKPS2]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAGGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCACGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTATAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATAGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATCGGGAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTACTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATGCGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGGATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAAGAACGATTGTT
TATATGAAGTATGA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• MalT-like TPR region (TPR_MalT) (154-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	42.368	100	0.427
rapF	Bacillus subtilis subsp. subtilis str. 168	42.667	99.469	0.424