Detailed information NTG0953762

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACHGMI_RS21550
• Genome accession: NZ_CP172417
• Coordinates: 3964342..3965475 (-)
• Length: 377 a.a.
• NCBI ID: WP_017696016.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AKPS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3959342..3970475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHGMI_RS21525	urtC	3959964..3961034 (-)	1071	WP_017696019.1	urea ABC transporter permease subunit UrtC	-
ACHGMI_RS21530	urtB	3961046..3961948 (-)	903	WP_017696018.1	urea ABC transporter permease subunit UrtB	-
ACHGMI_RS21535	urtA	3961981..3963237 (-)	1257	WP_017696017.1	urea ABC transporter substrate-binding protein	-
ACHGMI_RS21540	csbD	3963445..3963633 (-)	189	WP_014481173.1	stress response protein CsbD	-
ACHGMI_RS21545	-	3963707..3964186 (-)	480	WP_026113664.1	hypothetical protein	-
ACHGMI_RS21550	rapC	3964342..3965475 (-)	1134	WP_017696016.1	response regulator aspartate phosphatase RapB	Regulator
ACHGMI_RS21555	moaA	3965667..3966692 (-)	1026	WP_015483814.1	GTP 3',8-cyclase MoaA	-
ACHGMI_RS21560	fdhD	3966708..3967496 (-)	789	WP_014481178.1	formate dehydrogenase accessory sulfurtransferase FdhD	-
ACHGMI_RS21565	-	3967730..3967891 (-)	162	WP_003227706.1	hypothetical protein	-
ACHGMI_RS21570	-	3967986..3968660 (-)	675	WP_017696015.1	vWA domain-containing protein	-
ACHGMI_RS21575	-	3968713..3968853 (-)	141	WP_014481180.1	hypothetical protein	-
ACHGMI_RS21580	-	3968984..3969667 (-)	684	WP_017696013.1	vWA domain-containing protein	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 45032.17 Da
• Isoelectric Point: 4.7546

>NTDB_id=953762 ACHGMI_RS21550 WP_017696016.1 3964342..3965475(-) (rapC) [Bacillus subtilis strain AKPS2]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALTVFEDYQLEQLPKALFSLTRVLFKKQDSEAAMRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLDMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQKNDCLYEV

Nucleotide

• Length: 1134 bp

>NTDB_id=953762 ACHGMI_RS21550 WP_017696016.1 3964342..3965475(-) (rapC) [Bacillus subtilis strain AKPS2]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAGGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCACGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTATAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATAGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATCGGGAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTACTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATGCGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGGATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAAGAACGATTGTT
TATATGAAGTATGA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• MalT-like TPR region (TPR_MalT) (154-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	42.368	100	0.427
rapF	Bacillus subtilis subsp. subtilis str. 168	42.667	99.469	0.424