Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACHGMI_RS18735 Genome accession   NZ_CP172417
Coordinates   3411940..3412803 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain AKPS2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3406940..3417803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS18700 - 3407210..3407347 (+) 138 WP_157794908.1 hypothetical protein -
  ACHGMI_RS18705 - 3407439..3407693 (+) 255 WP_003244393.1 hypothetical protein -
  ACHGMI_RS18710 - 3407707..3408444 (-) 738 WP_017695504.1 protein-glutamine gamma-glutamyltransferase -
  ACHGMI_RS18715 mcpB 3408602..3410590 (+) 1989 WP_017695503.1 methyl-accepting chemotaxis protein McpB -
  ACHGMI_RS18720 tlpA 3410744..3411349 (+) 606 Protein_3625 methyl-accepting chemotaxis protein TlpA -
  ACHGMI_RS18725 - 3411333..3411701 (-) 369 WP_413158321.1 hypothetical protein -
  ACHGMI_RS18730 comX 3411717..3411938 (-) 222 WP_014480704.1 competence pheromone ComX -
  ACHGMI_RS18735 comQ 3411940..3412803 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ACHGMI_RS18740 degQ 3412988..3413128 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACHGMI_RS18745 - 3413350..3413412 (+) 63 Protein_3630 hypothetical protein -
  ACHGMI_RS18750 - 3413590..3413958 (+) 369 WP_017695529.1 hypothetical protein -
  ACHGMI_RS18755 pdeH 3413934..3415163 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ACHGMI_RS18760 - 3415300..3416772 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACHGMI_RS18765 - 3416788..3417339 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=953750 ACHGMI_RS18735 WP_014480705.1 3411940..3412803(-) (comQ) [Bacillus subtilis strain AKPS2]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=953750 ACHGMI_RS18735 WP_014480705.1 3411940..3412803(-) (comQ) [Bacillus subtilis strain AKPS2]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439