Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   QMM10_RS08860 Genome accession   NZ_AP025938
Coordinates   1751235..1752056 (-) Length   273 a.a.
NCBI ID   WP_000601678.1    Uniprot ID   A0A6I3U1Q8
Organism   Streptococcus pneumoniae strain PZ900701057     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1746235..1757056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM10_RS08815 (PC1044_17260) - 1746727..1747044 (-) 318 WP_000615767.1 thioredoxin family protein -
  QMM10_RS08820 (PC1044_17270) - 1747041..1747340 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  QMM10_RS08825 - 1747434..1747565 (+) 132 WP_050207302.1 hypothetical protein -
  QMM10_RS08830 (PC1044_17280) - 1747590..1747787 (-) 198 Protein_1733 N-acetylmuramoyl-L-alanine amidase family protein -
  QMM10_RS08835 (PC1044_17290) - 1748029..1748703 (-) 675 WP_000725750.1 membrane protein -
  QMM10_RS08840 (PC1044_17300) - 1748709..1749155 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  QMM10_RS08845 - 1749269..1749772 (-) 504 WP_000800942.1 phosphatase PAP2 family protein -
  QMM10_RS08850 (PC1044_17310) - 1749769..1750131 (-) 363 WP_000078804.1 DUF2200 family protein -
  QMM10_RS08855 (PC1044_17320) rcrQ 1750197..1751228 (-) 1032 WP_000506427.1 ATP-binding cassette domain-containing protein Regulator
  QMM10_RS08860 (PC1044_17330) rcrP 1751235..1752056 (-) 822 WP_000601678.1 ABC transporter permease Regulator
  QMM10_RS08865 (PC1044_17340) - 1752073..1752544 (-) 472 Protein_1740 MarR family winged helix-turn-helix transcriptional regulator -
  QMM10_RS08870 (PC1044_17350) - 1752668..1753378 (-) 711 WP_050072288.1 YebC/PmpR family DNA-binding transcriptional regulator -
  QMM10_RS08875 (PC1044_17360) ply 1754259..1755674 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  QMM10_RS08880 (PC1044_17370) - 1755685..1756095 (-) 411 WP_000595758.1 hypothetical protein -
  QMM10_RS08885 (PC1044_17380) - 1756088..1756696 (-) 609 WP_000083614.1 hypothetical protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30614.21 Da        Isoelectric Point: 5.9310

>NTDB_id=95375 QMM10_RS08860 WP_000601678.1 1751235..1752056(-) (rcrP) [Streptococcus pneumoniae strain PZ900701057]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=95375 QMM10_RS08860 WP_000601678.1 1751235..1752056(-) (rcrP) [Streptococcus pneumoniae strain PZ900701057]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I3U1Q8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

57.193

100

0.597


Multiple sequence alignment