Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACHGMI_RS18385 Genome accession   NZ_CP172417
Coordinates   3353809..3354672 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain AKPS2     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3348809..3359672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS18350 - 3348977..3349453 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ACHGMI_RS18355 - 3349453..3349737 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  ACHGMI_RS18360 mnhG 3349721..3350095 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ACHGMI_RS18365 - 3350134..3350514 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  ACHGMI_RS18370 comA 3350533..3351177 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACHGMI_RS18375 comP 3351258..3353570 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  ACHGMI_RS18380 comX 3353586..3353807 (-) 222 WP_014480704.1 competence pheromone ComX -
  ACHGMI_RS18385 comQ 3353809..3354672 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ACHGMI_RS18390 degQ 3354857..3354997 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACHGMI_RS18395 - 3355219..3355281 (+) 63 Protein_3560 hypothetical protein -
  ACHGMI_RS18400 - 3355459..3355827 (+) 369 WP_017695529.1 hypothetical protein -
  ACHGMI_RS18405 pdeH 3355803..3357032 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ACHGMI_RS18410 - 3357169..3358641 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACHGMI_RS18415 - 3358657..3359208 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=953746 ACHGMI_RS18385 WP_014480705.1 3353809..3354672(-) (comQ) [Bacillus subtilis strain AKPS2]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=953746 ACHGMI_RS18385 WP_014480705.1 3353809..3354672(-) (comQ) [Bacillus subtilis strain AKPS2]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439