Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACHGMI_RS06350 Genome accession   NZ_CP172417
Coordinates   1171567..1172310 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain AKPS2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1166567..1177310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS06325 - 1166586..1166881 (+) 296 Protein_1181 hypothetical protein -
  ACHGMI_RS06330 - 1166947..1168338 (+) 1392 WP_072692642.1 hypothetical protein -
  ACHGMI_RS06335 sndC 1168410..1169600 (+) 1191 WP_041052746.1 N-acetyl amino acid acetylase SndC -
  ACHGMI_RS06340 ecsC 1169618..1170328 (-) 711 WP_041345180.1 EcsC family protein -
  ACHGMI_RS06345 ecsB 1170348..1171574 (-) 1227 WP_041345182.1 ABC transporter permease EcsB -
  ACHGMI_RS06350 pptA 1171567..1172310 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ACHGMI_RS06355 hinT 1172797..1173234 (+) 438 WP_003233231.1 HIT family protein -
  ACHGMI_RS06360 serC 1173381..1174460 (+) 1080 WP_041345184.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACHGMI_RS06365 trpP 1174585..1175103 (+) 519 WP_003233236.1 tryptophan transporter TrpP -
  ACHGMI_RS06370 - 1175177..1175368 (-) 192 WP_024571664.1 hypothetical protein -
  ACHGMI_RS06375 yhaH 1175498..1175854 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  ACHGMI_RS06380 scoC 1176032..1176643 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ACHGMI_RS06385 yhaI 1176640..1176981 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=953654 ACHGMI_RS06350 WP_003233230.1 1171567..1172310(-) (pptA) [Bacillus subtilis strain AKPS2]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=953654 ACHGMI_RS06350 WP_003233230.1 1171567..1172310(-) (pptA) [Bacillus subtilis strain AKPS2]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACACTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547