Detailed information NTG0953641

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACHGMI_RS03375
• Genome accession: NZ_CP172417
• Coordinates: 640369..641544 (+)
• Length: 391 a.a.
• NCBI ID: WP_129093249.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain AKPS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 635369..646544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHGMI_RS03350	yddF	635419..635745 (+)	327	WP_129093244.1	YddF family protein	-
ACHGMI_RS03355	conG	635749..638190 (+)	2442	WP_129093245.1	CD3337/EF1877 family mobilome membrane protein	-
ACHGMI_RS03360	cwlT	638187..639176 (+)	990	WP_129093246.1	bifunctional lytic transglycosylase/C40 family peptidase	-
ACHGMI_RS03365	-	639191..639697 (+)	507	WP_129093247.1	hypothetical protein	-
ACHGMI_RS03370	-	639760..640143 (+)	384	WP_394355925.1	cystatin-like fold lipoprotein	-
ACHGMI_RS03375	rapF	640369..641544 (+)	1176	WP_129093249.1	Rap family tetratricopeptide repeat protein	Regulator
ACHGMI_RS03380	-	641869..642504 (+)	636	WP_210216699.1	PBECR4 domain-containing protein	-
ACHGMI_RS03385	-	642843..644639 (+)	1797	WP_017696994.1	T7SS effector LXG polymorphic toxin	-
ACHGMI_RS03390	-	644652..645104 (+)	453	WP_017696995.1	SMI1/KNR4 family protein	-
ACHGMI_RS03395	-	645322..645885 (+)	564	WP_017696997.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46397.39 Da
• Isoelectric Point: 4.6370

>NTDB_id=953641 ACHGMI_RS03375 WP_129093249.1 640369..641544(+) (rapF) [Bacillus subtilis strain AKPS2]
MRSVFLDKDKIPYDLVTKNLNEWYTSIKNDQVEKAEIIKTEVENELLNMEENQDALLYYQLLEFRHEIMLSYMESKEIDD
LNSAYETIKEIEEQGQLTGMLEYYYYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFKEYDEYAVQTLRCQFIVAGNYIDSLEYEKALQVFFESLEIAKEINIDHLIGMSHINIGICFDELEEY
TKASRHLELSLEYLEKCNNSFVSKALFILTHVKAKQKNFNLAFEYFKKGKMYSNKNNDNEYAAKFKILEGLYFSNGEYHH
IEDAFTYLESKKLYADVENYAIEVGDYFHQTGDLVLSNQYYRLSIEARQKIKKGEIINENHSDSVGSAGIE

Nucleotide

• Length: 1176 bp

>NTDB_id=953641 ACHGMI_RS03375 WP_129093249.1 640369..641544(+) (rapF) [Bacillus subtilis strain AKPS2]
TTGCGGAGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACCTAGTTACAAAAAATCTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAATGAATTACTAAACATGGAAGAAAACCAAG
ATGCATTGTTATATTATCAGCTATTGGAATTTAGGCACGAGATAATGTTAAGTTATATGGAATCAAAGGAAATAGATGAT
TTGAACAGCGCTTATGAGACTATAAAAGAGATTGAAGAGCAAGGGCAATTAACCGGAATGCTGGAATACTATTATTATTT
TTTTAAAGGTATGTATGAATTTAGGCGTAAAGAATTGACTACGGCGATAAGCGCCTATCGAATAGCAGAATCAAAGTTAT
CGGAAGTTGAGGACGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTGTATTATTATATGAAACAAACGTAT
TTCTCTATGAATTATGCAAATCGTGCGTTAAAAATATTTAAAGAGTATGATGAATATGCTGTTCAAACGTTACGGTGTCA
ATTCATTGTTGCCGGAAATTATATTGATTCATTGGAATATGAGAAAGCATTACAAGTTTTTTTTGAATCATTGGAGATAG
CAAAAGAAATAAATATTGATCATTTAATTGGAATGTCTCATATAAATATCGGTATATGTTTTGATGAATTGGAGGAATAT
ACAAAGGCATCCCGTCACTTGGAATTGTCTTTAGAGTATTTAGAAAAATGCAATAATTCATTTGTGTCGAAAGCGTTATT
CATTTTGACACATGTCAAAGCGAAACAGAAGAACTTTAATTTGGCTTTTGAATATTTTAAGAAAGGGAAAATGTATAGTA
ATAAAAATAATGATAATGAATACGCGGCGAAATTCAAAATATTAGAAGGACTTTACTTTTCAAATGGTGAATATCATCAT
ATTGAAGATGCTTTTACTTATCTAGAATCAAAAAAATTGTATGCTGATGTTGAGAATTACGCCATAGAAGTTGGGGATTA
CTTTCACCAAACGGGCGATTTGGTGCTTTCAAACCAATATTATCGTTTAAGCATTGAAGCCAGACAAAAAATAAAAAAAG
GAGAGATTATCAATGAAAATCACTCGGACTCTGTTGGCAGTGCTGGTATTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	39.286	93.095	0.366
rapC	Bacillus subtilis subsp. subtilis str. 168	37.666	96.419	0.363