Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACHGMI_RS00255 Genome accession   NZ_CP172417
Coordinates   47095..47922 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain AKPS2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 42095..52922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS00230 efpO 43158..44600 (+) 1443 WP_017696384.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACHGMI_RS00235 tmk 44597..45235 (+) 639 WP_015253015.1 dTMP kinase -
  ACHGMI_RS00240 darA 45309..45638 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ACHGMI_RS00245 yaaR 45651..46091 (+) 441 WP_009966249.1 YaaR family protein -
  ACHGMI_RS00250 holB 46103..47092 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ACHGMI_RS00255 yaaT 47095..47922 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ACHGMI_RS00260 yabA 47937..48296 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ACHGMI_RS00265 trmNF 48355..49098 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACHGMI_RS00270 yazA 49085..49384 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ACHGMI_RS00275 rsmI 49359..50237 (+) 879 WP_017696383.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACHGMI_RS00280 abrB 50286..50576 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=953618 ACHGMI_RS00255 WP_003226767.1 47095..47922(+) (yaaT) [Bacillus subtilis strain AKPS2]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=953618 ACHGMI_RS00255 WP_003226767.1 47095..47922(+) (yaaT) [Bacillus subtilis strain AKPS2]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGTGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996