Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   ACGH2B_RS10840 Genome accession   NZ_CP172415
Coordinates   2823074..2824198 (-) Length   374 a.a.
NCBI ID   WP_399087448.1    Uniprot ID   -
Organism   Streptomyces sp. BBFR2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2818074..2829198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGH2B_RS10820 (ACGH2B_10820) - 2819077..2819748 (+) 672 WP_399087440.1 pyridoxamine 5'-phosphate oxidase family protein -
  ACGH2B_RS10825 (ACGH2B_10825) - 2819781..2820389 (-) 609 WP_399087443.1 phosphatase PAP2 family protein -
  ACGH2B_RS10830 (ACGH2B_10830) - 2820794..2821609 (+) 816 WP_399087444.1 hypothetical protein -
  ACGH2B_RS10835 (ACGH2B_10835) - 2822024..2823013 (+) 990 WP_399087446.1 NAD-dependent epimerase/dehydratase family protein -
  ACGH2B_RS10840 (ACGH2B_10840) disA 2823074..2824198 (-) 1125 WP_399087448.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACGH2B_RS10845 (ACGH2B_10845) radA/sms 2824329..2825741 (-) 1413 WP_345077337.1 DNA repair protein RadA Machinery gene
  ACGH2B_RS10850 (ACGH2B_10850) - 2826272..2828086 (+) 1815 WP_399087451.1 sigma-70 family RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40128.87 Da        Isoelectric Point: 4.9271

>NTDB_id=953583 ACGH2B_RS10840 WP_399087448.1 2823074..2824198(-) (disA) [Streptomyces sp. BBFR2]
MAANDRASSPGRSGGGSGTDALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDISKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPERELVARDYVPEPTAKRSRTVPEALAELDALTHTELLELPTVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
VIERLVDHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=953583 ACGH2B_RS10840 WP_399087448.1 2823074..2824198(-) (disA) [Streptomyces sp. BBFR2]
GTGGCAGCCAACGACCGGGCATCGTCTCCCGGCAGGTCCGGCGGGGGTTCCGGCACCGACGCCCTGATGCGCGCCTCGCT
GAGCGCGGTCGCCCCCGGTACGGCCCTGCGCGACGGACTCGAACGCATCCTGCGCGGCAACACCGGCGGACTGATCGTCC
TCGGCTTCGACAAGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTGGACGGTGCTCTCGTGCTCGACAAGGACATCAGCAAGATCCTCCGCGCCGGGGTGCAACTGGTGCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGCAGCGCGTCTCCATCCAGGCGGGTTTCCCGG
TCGTCTCGGTGAGCCAGTCGATGCGGCTGATCGCCCTGTACGTCGACGGGGAGCGGCGCGTCCTGGAGGAGTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCTCCGCCGTCGCGCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGCCGCCTCCTGACGCTCCAGCTCGACGAGTTGATCGCC
GGTGTCGAGCCGGAGCGTGAGCTGGTCGCCCGCGACTACGTCCCCGAGCCGACCGCCAAGCGTTCCCGTACCGTCCCCGA
GGCGCTCGCGGAGCTGGACGCGCTCACCCACACCGAGCTGCTGGAACTGCCGACCGTCGCCCGCGCGTTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCCGCCGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
GTCATCGAGCGTCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTGCTGGCCGCCAGCGTCGACGACCTCCAGGCGGTGGA
CGGCGTCGGTGAGGCCCGCGCCCGCTCCGTCCGCGAGGGCCTGTCCCGCCTCGCCGAGTCGTCGATCCTCGAACGGTACG
TCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

43.767

96.524

0.422