Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACGH2B_RS10465 Genome accession   NZ_CP172415
Coordinates   2741829..2743562 (-) Length   577 a.a.
NCBI ID   WP_399087321.1    Uniprot ID   -
Organism   Streptomyces sp. BBFR2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2736829..2748562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGH2B_RS10450 (ACGH2B_10450) - 2737724..2738587 (+) 864 WP_399087317.1 alpha/beta hydrolase family protein -
  ACGH2B_RS10455 (ACGH2B_10455) - 2738611..2739750 (+) 1140 WP_399087319.1 Fic family protein -
  ACGH2B_RS10460 (ACGH2B_10460) rcrQ 2739829..2741730 (-) 1902 WP_399096903.1 ABC transporter ATP-binding protein Regulator
  ACGH2B_RS10465 (ACGH2B_10465) rcrP 2741829..2743562 (-) 1734 WP_399087321.1 ABC transporter ATP-binding protein Regulator
  ACGH2B_RS10470 (ACGH2B_10470) - 2743909..2744154 (+) 246 WP_399096906.1 MoaD/ThiS family protein -
  ACGH2B_RS10475 (ACGH2B_10475) - 2744165..2745631 (+) 1467 WP_399087323.1 hypothetical protein -
  ACGH2B_RS10480 (ACGH2B_10480) - 2745854..2746552 (+) 699 WP_399087325.1 DUF2993 domain-containing protein -
  ACGH2B_RS10485 (ACGH2B_10485) - 2746758..2746865 (+) 108 WP_391640940.1 Ms5788A family Cys-rich leader peptide -
  ACGH2B_RS10490 (ACGH2B_10490) - 2747035..2747880 (+) 846 WP_399087327.1 sulfurtransferase -
  ACGH2B_RS10495 (ACGH2B_10495) - 2747915..2748202 (+) 288 WP_143943862.1 DUF1416 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62129.41 Da        Isoelectric Point: 7.1645

>NTDB_id=953581 ACGH2B_RS10465 WP_399087321.1 2741829..2743562(-) (rcrP) [Streptomyces sp. BBFR2]
MLVRLAWAHLRPHRRAIALIVLLQLIQTLATISLPTLNADIIDKGVVLGDTGYILRLGGYMLAIALLQVGCATGAVHYGA
RTAMRLGRDIRAAVFDRVQTFSAREVAAFGAPSLITRTTNDVQQVQMLVLMTFTMMVAAPIMCVGGVIMALNQDVPLSGL
LLVIVVVLGVIVSLIVRRLRPLFRSVQERIDTVNRVLREQITGIRVIRAFVRDRHEQRRFAVANTDLYDVSLSSGKLMST
MFPLVMLVVNLSSVAVVWFGGLRIDSGAMQIGSLTAFLSYLMYILMSVMMATFMTMMLPRAEVCAERIQEVLDTDSSVTP
PEHPVTALSRPGELELRGVEFRFPGAEEPVLKDISLHARPGETTAVIGSTGSGKSTLIGLVPRLFDATGGTVLVGGEDVR
TLDEATLARTVGLVPQKPYLFSGTIASNLRHGDPDATDDDLWRALETAQAKEFVAAMEGGLQAPIAQGGSNVSGGQRQRL
AIARALVGKPDLYLFDDSFSALDYATDAALRAALARETGGASVVIVAQRVATIRGADRIVVLDEGRVVGTGTHAELMAGN
ATYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=953581 ACGH2B_RS10465 WP_399087321.1 2741829..2743562(-) (rcrP) [Streptomyces sp. BBFR2]
GTGTTGGTCCGACTCGCGTGGGCACATCTGCGGCCCCACAGGCGCGCGATAGCGCTGATCGTCCTCCTCCAGCTCATCCA
GACGCTGGCCACCATCTCCCTGCCCACCCTCAACGCCGACATCATCGACAAGGGCGTCGTCCTCGGGGACACGGGCTACA
TCCTGCGCCTGGGCGGCTACATGCTCGCCATCGCGCTGCTCCAGGTCGGCTGCGCGACCGGCGCCGTCCACTACGGCGCC
CGTACGGCGATGCGGCTGGGCCGGGACATCCGGGCGGCGGTCTTCGACCGGGTCCAGACGTTCTCCGCCCGGGAGGTCGC
CGCCTTCGGCGCGCCCTCGCTGATCACCCGGACCACCAATGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGACGTTCA
CGATGATGGTGGCCGCGCCGATCATGTGCGTCGGCGGCGTGATCATGGCGCTCAACCAGGACGTGCCGCTCTCCGGCCTC
CTCCTGGTGATCGTCGTGGTCCTCGGGGTGATCGTCTCCCTCATCGTGCGCCGCCTGCGGCCGCTGTTCCGCAGCGTCCA
GGAGCGCATCGACACGGTCAACCGCGTGCTGCGCGAGCAGATCACCGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACC
GCCACGAACAGCGCCGCTTCGCCGTCGCCAACACCGACCTCTACGACGTGTCGCTCAGCTCCGGCAAGCTGATGTCGACG
ATGTTCCCGCTGGTCATGCTGGTCGTGAACCTCTCCAGCGTCGCCGTCGTCTGGTTCGGCGGGCTGCGCATCGACTCCGG
CGCGATGCAGATCGGCTCGCTCACCGCGTTCCTCAGCTACCTCATGTACATCCTCATGTCGGTGATGATGGCGACGTTCA
TGACGATGATGCTGCCGCGCGCCGAGGTCTGCGCCGAGCGCATCCAGGAAGTGCTGGACACCGACAGCAGCGTCACCCCG
CCCGAGCACCCCGTCACCGCCCTCAGCCGCCCCGGCGAGCTGGAGCTGCGCGGCGTGGAGTTCCGCTTCCCCGGCGCCGA
GGAACCCGTACTCAAGGACATCTCGCTGCACGCCCGGCCCGGCGAGACCACCGCCGTCATCGGCTCCACCGGCAGCGGCA
AGTCCACCCTGATCGGCCTGGTGCCCCGCCTCTTCGACGCGACCGGCGGCACCGTCCTGGTCGGCGGCGAGGACGTCCGC
ACCCTCGACGAGGCGACGCTCGCCCGCACCGTCGGCCTCGTCCCGCAGAAGCCGTACCTCTTCTCCGGCACCATCGCGAG
CAACCTCCGCCACGGTGATCCGGACGCCACCGACGACGACCTCTGGCGGGCGCTGGAGACCGCGCAGGCCAAGGAGTTCG
TCGCGGCGATGGAGGGCGGTCTCCAGGCGCCGATCGCCCAGGGCGGCTCCAACGTCTCCGGCGGCCAGCGCCAGCGCCTG
GCCATCGCCCGCGCCCTCGTCGGCAAGCCCGACCTCTACCTCTTCGACGACTCCTTCTCCGCCCTCGACTACGCCACCGA
CGCCGCCCTGCGCGCCGCGCTGGCCCGGGAGACCGGCGGCGCGAGCGTCGTCATCGTGGCGCAGCGCGTCGCCACCATCC
GCGGTGCCGACCGCATCGTCGTGCTCGACGAGGGCCGCGTCGTCGGCACCGGAACCCACGCCGAGCTGATGGCCGGCAAC
GCGACGTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.54

100

0.393