Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP91_RS05615 | Genome accession | NZ_CP148262 |
| Coordinates | 1062874..1063176 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1322HCJ0007 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1057874..1068176
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP91_RS05590 (WHP91_05590) | rpsR | 1058237..1058497 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP91_RS05595 (WHP91_05595) | lon | 1058557..1060932 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP91_RS05600 (WHP91_05600) | - | 1060949..1061596 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP91_RS05605 (WHP91_05605) | fliW | 1061757..1062146 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP91_RS05610 (WHP91_05610) | proC | 1062146..1062877 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP91_RS05615 (WHP91_05615) | ctsT | 1062874..1063176 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP91_RS05620 (WHP91_05620) | - | 1063173..1063835 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP91_RS05625 (WHP91_05625) | - | 1063832..1064284 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP91_RS05630 (WHP91_05630) | hemD | 1064281..1064910 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP91_RS05635 (WHP91_05635) | thiE | 1064888..1065520 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP91_RS05640 (WHP91_05640) | thiD | 1065510..1066322 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP91_RS05645 (WHP91_05645) | - | 1066319..1067005 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP91_RS05650 (WHP91_05650) | - | 1067002..1067763 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953567 WHP91_RS05615 WP_002853046.1 1062874..1063176(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0007]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953567 WHP91_RS05615 WP_002853046.1 1062874..1063176(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0007]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |