Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ35_RS05635 | Genome accession | NZ_CP148261 |
| Coordinates | 1062252..1062554 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1322HCJ0013 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1057252..1067554
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ35_RS05610 (WHQ35_05610) | rpsR | 1057615..1057875 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ35_RS05615 (WHQ35_05615) | lon | 1057935..1060310 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHQ35_RS05620 (WHQ35_05620) | - | 1060327..1060974 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ35_RS05625 (WHQ35_05625) | fliW | 1061135..1061524 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ35_RS05630 (WHQ35_05630) | proC | 1061524..1062255 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ35_RS05635 (WHQ35_05635) | ctsT | 1062252..1062554 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ35_RS05640 (WHQ35_05640) | - | 1062551..1063213 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ35_RS05645 (WHQ35_05645) | - | 1063210..1063662 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ35_RS05650 (WHQ35_05650) | hemD | 1063659..1064288 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHQ35_RS05655 (WHQ35_05655) | thiE | 1064266..1064898 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ35_RS05660 (WHQ35_05660) | thiD | 1064888..1065700 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ35_RS05665 (WHQ35_05665) | - | 1065697..1066383 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ35_RS05670 (WHQ35_05670) | - | 1066380..1067141 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953539 WHQ35_RS05635 WP_002853046.1 1062252..1062554(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0013]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953539 WHQ35_RS05635 WP_002853046.1 1062252..1062554(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0013]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |