Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ19_RS05260 | Genome accession | NZ_CP148260 |
| Coordinates | 1014131..1014433 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1322HCJ0014 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1009131..1019433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ19_RS05235 (WHQ19_05235) | rpsR | 1009494..1009754 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ19_RS05240 (WHQ19_05240) | lon | 1009814..1012189 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ19_RS05245 (WHQ19_05245) | - | 1012206..1012853 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ19_RS05250 (WHQ19_05250) | fliW | 1013014..1013403 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ19_RS05255 (WHQ19_05255) | proC | 1013403..1014134 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ19_RS05260 (WHQ19_05260) | ctsT | 1014131..1014433 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHQ19_RS05265 (WHQ19_05265) | - | 1014430..1015092 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHQ19_RS05270 (WHQ19_05270) | - | 1015089..1015541 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHQ19_RS05275 (WHQ19_05275) | hemD | 1015538..1016167 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHQ19_RS05280 (WHQ19_05280) | thiE | 1016145..1016777 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHQ19_RS05285 (WHQ19_05285) | thiD | 1016767..1017579 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ19_RS05290 (WHQ19_05290) | - | 1017576..1018262 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHQ19_RS05295 (WHQ19_05295) | - | 1018259..1019020 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=953512 WHQ19_RS05260 WP_002855822.1 1014131..1014433(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0014]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953512 WHQ19_RS05260 WP_002855822.1 1014131..1014433(+) (ctsT) [Campylobacter jejuni strain Z1322HCJ0014]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |