Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WHQ09_RS06980 Genome accession   NZ_CP148259
Coordinates   1335087..1336055 (+) Length   322 a.a.
NCBI ID   WP_002868462.1    Uniprot ID   A0A5Z0B9N9
Organism   Campylobacter jejuni strain Z1322HCJ0017     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1330087..1341055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHQ09_RS06955 (WHQ09_06955) cdsA 1330997..1331722 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  WHQ09_RS06960 (WHQ09_06960) - 1331731..1332069 (-) 339 WP_002852397.1 hypothetical protein -
  WHQ09_RS06965 (WHQ09_06965) - 1332071..1333378 (-) 1308 WP_002868460.1 NFACT family protein -
  WHQ09_RS06970 (WHQ09_06970) mobA 1333440..1334015 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  WHQ09_RS06975 (WHQ09_06975) pldA 1334012..1335001 (+) 990 WP_002868461.1 phospholipase A -
  WHQ09_RS06980 (WHQ09_06980) ceuB 1335087..1336055 (+) 969 WP_002868462.1 ABC transporter permease Machinery gene
  WHQ09_RS06985 (WHQ09_06985) ceuC 1336048..1336986 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  WHQ09_RS06990 (WHQ09_06990) ceuD 1336983..1337738 (+) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  WHQ09_RS06995 (WHQ09_06995) ceuB 1337751..1338743 (+) 993 WP_002859640.1 enterochelin ABC transporter substrate-binding protein CeuB -
  WHQ09_RS07005 (WHQ09_07005) - 1338969..1339523 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35467.43 Da        Isoelectric Point: 9.6678

>NTDB_id=953492 WHQ09_RS06980 WP_002868462.1 1335087..1336055(+) (ceuB) [Campylobacter jejuni strain Z1322HCJ0017]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTIAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=953492 WHQ09_RS06980 WP_002868462.1 1335087..1336055(+) (ceuB) [Campylobacter jejuni strain Z1322HCJ0017]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTATAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Z0B9N9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991