Detailed information NTG0953459

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACHZDB_RS11890
• Genome accession: NZ_CP172405
• Coordinates: 2598760..2600961 (-)
• Length: 733 a.a.
• NCBI ID: WP_399424121.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LB503
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2593760..2605961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHZDB_RS11870 (ACHZDB_11870)	hslU	2594798..2596129 (-)	1332	WP_077201140.1	HslU--HslV peptidase ATPase subunit	-
ACHZDB_RS11875 (ACHZDB_11875)	hslV	2596159..2596710 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
ACHZDB_RS11880 (ACHZDB_11880)	-	2596826..2597377 (-)	552	WP_005429952.1	SPOR domain-containing protein	-
ACHZDB_RS11885 (ACHZDB_11885)	cytR	2597546..2598556 (-)	1011	Protein_2262	DNA-binding transcriptional regulator CytR	-
ACHZDB_RS11890 (ACHZDB_11890)	priA	2598760..2600961 (-)	2202	WP_399424121.1	primosomal protein N'	Machinery gene
ACHZDB_RS11895 (ACHZDB_11895)	rpmE	2601257..2601475 (+)	219	WP_038890899.1	50S ribosomal protein L31	-
ACHZDB_RS11900 (ACHZDB_11900)	rpsJ	2601949..2602260 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACHZDB_RS11905 (ACHZDB_11905)	rplC	2602275..2602904 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
ACHZDB_RS11910 (ACHZDB_11910)	rplD	2602922..2603524 (+)	603	WP_005435074.1	50S ribosomal protein L4	-
ACHZDB_RS11915 (ACHZDB_11915)	rplW	2603521..2603823 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
ACHZDB_RS11920 (ACHZDB_11920)	rplB	2603839..2604663 (+)	825	WP_005528534.1	50S ribosomal protein L2	-
ACHZDB_RS11925 (ACHZDB_11925)	rpsS	2604685..2604963 (+)	279	WP_005431614.1	30S ribosomal protein S19	-
ACHZDB_RS11930 (ACHZDB_11930)	rplV	2604974..2605306 (+)	333	WP_005528535.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 82017.52 Da
• Isoelectric Point: 8.7448

>NTDB_id=953459 ACHZDB_RS11890 WP_399424121.1 2598760..2600961(-) (priA) [Vibrio campbellii strain LB503]
MRPSIARVALPVPLDKQFDYVIPSHLFPVIGGRVSVPFGRQTLVGIVTAMVNHSDFPKEQLKAIKAVLDAQPVWPEKLYS
LLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITASGKDKLMQGLGRAVKQQRALQMLVNGSVPHQEFIDQE
IGSTVLKSLEERGWVERIEKKPTITKWGQQVEFDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKP
VLEQGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLSARDKAAGIIIGTRSALLTPFADLGIIIVD
EEHDSSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGLYLD
SGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVINQCQGCG
STQLVTVGVGTEQLELQLAELFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDVD
GSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHHPEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSFLTLFK
AEANQSEVVEDFLRQVRFTLESHPLFDDSCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAKK
VRWNLDIEPQDLS

Nucleotide

• Length: 2202 bp

>NTDB_id=953459 ACHZDB_RS11890 WP_399424121.1 2598760..2600961(-) (priA) [Vibrio campbellii strain LB503]
ATGCGTCCATCCATCGCCCGAGTAGCACTGCCAGTCCCGCTCGACAAACAGTTTGACTATGTCATACCTAGTCACCTTTT
CCCTGTGATTGGCGGACGCGTTTCTGTGCCTTTTGGTCGGCAGACTTTGGTTGGCATCGTGACCGCCATGGTTAATCATT
CAGACTTTCCCAAAGAGCAACTGAAAGCGATTAAAGCGGTATTAGATGCCCAACCAGTTTGGCCAGAAAAACTCTATTCT
TTATTGACTTGGTGCAGCCAGTTTTACCAGTATCCACTTGGTGACACACTTCATAATGCAATGCCTGCTGCCCTGCGTAA
GGGAAAACCTGCCGATTTCGCGACATTACAAGAGTGGCAAATCACTGCGTCGGGTAAAGATAAGCTGATGCAAGGCTTAG
GGCGAGCAGTCAAGCAACAGCGTGCTTTGCAGATGCTGGTCAATGGTTCAGTGCCACACCAAGAGTTCATCGACCAAGAA
ATTGGCTCTACCGTACTTAAGTCTTTGGAAGAGAGAGGCTGGGTCGAACGTATAGAGAAAAAGCCGACGATCACTAAGTG
GGGCCAACAAGTTGAGTTCGATGTTGAAAAACCAAAGCTCAACCACGAGCAAGCTTTGGCGATTGCTAGCGTAAACAGCC
AAACTGGCTTTGCCTGCTATTTATTAGAGGGCGTTACAGGTTCCGGTAAAACCGAAGTTTACCTTAACCTCATTAAGCCA
GTACTGGAACAAGGCAAGCAAGCTTTGGTGCTCGTCCCTGAGATAGGCCTGACACCCCAAACTATTAACCGCTTCAAGCG
TCGCTTCAATGTGCCTGTGGATGTCATTCACTCTGGGTTAAATGATACCGAGCGACTCAACGCTTGGCTTTCTGCGCGAG
ACAAAGCCGCCGGCATCATTATTGGTACGCGCTCTGCCCTACTGACGCCTTTTGCTGATCTTGGCATTATCATTGTCGAT
GAAGAACACGACTCGTCTTATAAACAACAAGATAGCCTGCGCTACCATGCTCGTGATGTTGCGGTGATGCGTGCACATAA
AGAGCAAGTACCTATTGTCCTCGGCTCTGCCACGCCGGCCTTAGAAACACTACACAACGCATTGACAGGCAAGTACCACC
ATTTAACGCTGACGCAACGCGCCGGTTCTGCCGTTCCGACCACTAATAAGGTACTTGATGTTAAAGGCCTCTATCTAGAC
AGTGGCTTATCCGCACCTTTGATTGCTGAAATGCGTAAACACCTTAAAGCGGGCAACCAAGTGATGCTGTTCTTAAACCG
TCGCGGCTTCTCACCGGCGTTAATGTGCCATGAATGTGGCTGGATTGCGGAATGTAAACGCTGTGATGCTTACTACACCT
TCCACCAATACAGCAATGAGATTCGCTGTCACCATTGTGGCTCACAGCAGCCTGTCATTAATCAATGCCAAGGTTGTGGT
TCGACTCAGTTGGTCACTGTGGGTGTGGGTACCGAACAGCTTGAGTTGCAACTGGCTGAGCTCTTCCCAGAATACAAAGC
CATTCGTATTGATAGAGACAGCACGCGCCGTAAAGGTAGCCTAGAAGATGCACTCGAATCGATTCGTAAAGGCGAATACC
AAATTCTAATTGGTACGCAGATGTTAGCAAAAGGTCACCACTTCCCAAATGTGACGCTTGTTGCGCTACTCGATGTTGAT
GGTTCCCTCTATAGTAGTGACTTCCGCGCCTCCGAGAGACTGGCTCAACTGTTTATTCAGGTCGCAGGTCGCGCAGGTCG
CGCAAGCAAACCCGGTGAAGTGATATTGCAAACTCACCACCCAGAACACAGTTTACTGCAAGCTCTACTGCAGAAAGACT
ATCGCCACTTCGCTATGACCGCATTGGAAGAGCGTAAACTCGCCCAACTGCCACCGTATAGCTTCTTGACCTTATTTAAA
GCAGAAGCGAACCAAAGCGAAGTGGTCGAAGACTTTTTACGTCAGGTACGTTTTACCCTTGAATCGCACCCATTGTTCGA
TGATAGCTGCATGGTGTTGGGGCCGACACCATCACCACTGGCTAAGCGCGCTGGCAAATATCGATGGCAGCTTTTACTGC
AAACTCAGCATCGCTCATTGATGCAAAAGTTATTAACCAGTGCGAAACCTGCTATTGAGTTGTTGCCAAATGCCAAGAAA
GTTCGCTGGAATTTAGACATAGAGCCACAGGATCTCAGCTAG

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (445-471)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• Helicase conserved C-terminal domain (Helicase_C) (499-588)

• DEAD/DEAH box helicase (DEAD) (219-364)

• Primosomal protein N C-terminal domain (PriA_C) (632-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	44.626	100	0.447