Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACHZEV_RS05580 Genome accession   NZ_CP172401
Coordinates   1155619..1156464 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain M22.2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1150619..1161464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHZEV_RS05535 (ACHZEV_05535) - 1150874..1151150 (+) 277 Protein_1083 site-specific integrase -
  ACHZEV_RS05540 (ACHZEV_05540) - 1151143..1151370 (+) 228 Protein_1084 Abi family protein -
  ACHZEV_RS05545 (ACHZEV_05545) rpsR 1151607..1151849 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACHZEV_RS05550 (ACHZEV_05550) ssbA 1151901..1152404 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACHZEV_RS05555 (ACHZEV_05555) rpsF 1152425..1152721 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACHZEV_RS05560 (ACHZEV_05560) - 1152965..1153156 (+) 192 WP_001052481.1 hypothetical protein -
  ACHZEV_RS05565 (ACHZEV_05565) ychF 1153242..1154339 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACHZEV_RS05570 (ACHZEV_05570) - 1154351..1154554 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACHZEV_RS05575 (ACHZEV_05575) - 1154584..1155465 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACHZEV_RS05580 (ACHZEV_05580) spo0J 1155619..1156464 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACHZEV_RS05585 (ACHZEV_05585) - 1157128..1158231 (+) 1104 WP_000655690.1 PLP-dependent transferase -
  ACHZEV_RS05590 (ACHZEV_05590) metC 1158228..1159388 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACHZEV_RS05595 (ACHZEV_05595) - 1159357..1161198 (+) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=953351 ACHZEV_RS05580 WP_001825659.1 1155619..1156464(-) (spo0J) [Staphylococcus aureus strain M22.2]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=953351 ACHZEV_RS05580 WP_001825659.1 1155619..1156464(-) (spo0J) [Staphylococcus aureus strain M22.2]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381