Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WHP34_RS06635 Genome accession   NZ_CP148234
Coordinates   1291863..1292831 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain Z1323CCJ0020     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1286863..1297831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP34_RS06610 (WHP34_06610) cdsA 1287773..1288498 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  WHP34_RS06615 (WHP34_06615) - 1288507..1288845 (-) 339 WP_002852397.1 hypothetical protein -
  WHP34_RS06620 (WHP34_06620) - 1288847..1290154 (-) 1308 WP_032586025.1 NFACT family protein -
  WHP34_RS06625 (WHP34_06625) mobA 1290216..1290791 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  WHP34_RS06630 (WHP34_06630) pldA 1290788..1291777 (+) 990 WP_002871962.1 phospholipase A -
  WHP34_RS06635 (WHP34_06635) ceuB 1291863..1292831 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  WHP34_RS06640 (WHP34_06640) ceuC 1292824..1293762 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  WHP34_RS06645 (WHP34_06645) ceuD 1293759..1294514 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  WHP34_RS06650 (WHP34_06650) ceuB 1294527..1295519 (+) 993 WP_002852385.1 enterochelin ABC transporter substrate-binding protein CeuB -
  WHP34_RS06660 (WHP34_06660) - 1295745..1296299 (-) 555 WP_002871963.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=953217 WHP34_RS06635 WP_002872671.1 1291863..1292831(+) (ceuB) [Campylobacter jejuni strain Z1323CCJ0020]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=953217 WHP34_RS06635 WP_002872671.1 1291863..1292831(+) (ceuB) [Campylobacter jejuni strain Z1323CCJ0020]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991