Detailed information NTG0953189

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6E9_RS06045
• Genome accession: NZ_CP172392
• Coordinates: 1137291..1138235 (+)
• Length: 314 a.a.
• NCBI ID: WP_002796919.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH507
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1132291..1143235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6E9_RS06020 (ACH6E9_06025)	-	1133055..1133693 (+)	639	WP_002782963.1	IS607-like element ISChh1 family transposase	-
ACH6E9_RS06025 (ACH6E9_06030)	-	1133680..1134972 (+)	1293	WP_002915795.1	RNA-guided endonuclease TnpB family protein	-
ACH6E9_RS06030 (ACH6E9_06035)	-	1135137..1135979 (+)	843	WP_395941719.1	asparagine synthase-related protein	-
ACH6E9_RS06035 (ACH6E9_06040)	-	1135982..1136398 (+)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
ACH6E9_RS06040 (ACH6E9_06045)	-	1136417..1137232 (-)	816	WP_057991291.1	glycosyltransferase family 2 protein	-
ACH6E9_RS06045 (ACH6E9_06050)	waaF	1137291..1138235 (+)	945	WP_002796919.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6E9_RS06050 (ACH6E9_06055)	-	1138218..1139672 (-)	1455	WP_057041880.1	hypothetical protein	-
ACH6E9_RS06055 (ACH6E9_06060)	gmhA	1139684..1140244 (-)	561	WP_002796916.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6E9_RS06060 (ACH6E9_06065)	rfaE1	1140241..1141626 (-)	1386	WP_157142155.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6E9_RS06065 (ACH6E9_06070)	rfaD	1141619..1142572 (-)	954	WP_057991294.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6E9_RS06070 (ACH6E9_06075)	-	1142569..1143132 (-)	564	WP_002801394.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36158.61 Da
• Isoelectric Point: 10.1355

>NTDB_id=953189 ACH6E9_RS06045 WP_002796919.1 1137291..1138235(+) (waaF) [Campylobacter coli strain YH507]
MKIFIHLPTWLGDAVMASSALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHIAAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=953189 ACH6E9_RS06045 WP_002796919.1 1137291..1138235(+) (waaF) [Campylobacter coli strain YH507]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTTATGGCTTCATCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCATATAGCTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.605	99.045	0.917