Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP32_RS05275 | Genome accession | NZ_CP148227 |
| Coordinates | 1013610..1013912 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0040 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1008610..1018912
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP32_RS05250 (WHP32_05250) | rpsR | 1008973..1009233 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP32_RS05255 (WHP32_05255) | lon | 1009293..1011668 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP32_RS05260 (WHP32_05260) | - | 1011685..1012332 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP32_RS05265 (WHP32_05265) | fliW | 1012493..1012882 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP32_RS05270 (WHP32_05270) | proC | 1012882..1013613 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP32_RS05275 (WHP32_05275) | ctsT | 1013610..1013912 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP32_RS05280 (WHP32_05280) | - | 1013909..1014571 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP32_RS05285 (WHP32_05285) | - | 1014568..1015020 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP32_RS05290 (WHP32_05290) | hemD | 1015017..1015646 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WHP32_RS05295 (WHP32_05295) | thiE | 1015624..1016256 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP32_RS05300 (WHP32_05300) | thiD | 1016246..1017058 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP32_RS05305 (WHP32_05305) | - | 1017055..1017741 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP32_RS05310 (WHP32_05310) | - | 1017738..1018499 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953071 WHP32_RS05275 WP_002853046.1 1013610..1013912(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0040]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953071 WHP32_RS05275 WP_002853046.1 1013610..1013912(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0040]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |