Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ37_RS05195 | Genome accession | NZ_CP148226 |
| Coordinates | 984744..985046 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0042 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 979744..990046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ37_RS05170 (WHQ37_05170) | rpsR | 980107..980367 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ37_RS05175 (WHQ37_05175) | lon | 980427..982802 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHQ37_RS05180 (WHQ37_05180) | - | 982819..983466 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ37_RS05185 (WHQ37_05185) | fliW | 983627..984016 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ37_RS05190 (WHQ37_05190) | proC | 984016..984747 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ37_RS05195 (WHQ37_05195) | ctsT | 984744..985046 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ37_RS05200 (WHQ37_05200) | - | 985043..985705 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ37_RS05205 (WHQ37_05205) | - | 985702..986154 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ37_RS05210 (WHQ37_05210) | hemD | 986151..986780 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHQ37_RS05215 (WHQ37_05215) | thiE | 986758..987390 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ37_RS05220 (WHQ37_05220) | thiD | 987380..988192 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ37_RS05225 (WHQ37_05225) | - | 988189..988875 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ37_RS05230 (WHQ37_05230) | - | 988872..989633 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953043 WHQ37_RS05195 WP_002853046.1 984744..985046(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0042]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953043 WHQ37_RS05195 WP_002853046.1 984744..985046(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0042]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |