Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   QML92_RS08840 Genome accession   NZ_AP025937
Coordinates   1746947..1747984 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain PZ900700792     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1741947..1752984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QML92_RS08815 (PC0780_17330) - 1742748..1744079 (-) 1332 WP_000390039.1 hemolysin family protein -
  QML92_RS08820 (PC0780_17340) endA 1744308..1745132 (-) 825 WP_001036785.1 DNA-entry nuclease EndA Machinery gene
  QML92_RS08825 (PC0780_17350) - 1745171..1745359 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  QML92_RS08830 (PC0780_17360) murA 1745352..1746635 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QML92_RS08835 (PC0780_17370) - 1746659..1746889 (-) 231 WP_000250392.1 DUF1146 family protein -
  QML92_RS08840 (PC0780_17380) sepM 1746947..1747984 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  QML92_RS08845 (PC0780_17390) coaD 1747968..1748456 (-) 489 WP_050119439.1 pantetheine-phosphate adenylyltransferase -
  QML92_RS08850 (PC0780_17400) rsmD 1748446..1748985 (-) 540 WP_000706962.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QML92_RS08855 (PC0780_17410) asnA 1749050..1750042 (-) 993 WP_000747995.1 aspartate--ammonia ligase -
  QML92_RS08860 (PC0780_17420) - 1750154..1750837 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  QML92_RS08865 (PC0780_17430) - 1750893..1751633 (-) 741 WP_000152678.1 RNA methyltransferase -
  QML92_RS08870 (PC0780_17440) - 1751667..1751945 (+) 279 WP_001174613.1 acylphosphatase -
  QML92_RS08875 (PC0780_17450) yidC 1752023..1752949 (+) 927 WP_281956487.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=95303 QML92_RS08840 WP_000727277.1 1746947..1747984(-) (sepM) [Streptococcus pneumoniae strain PZ900700792]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=95303 QML92_RS08840 WP_000727277.1 1746947..1747984(-) (sepM) [Streptococcus pneumoniae strain PZ900700792]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGCATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCCATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment