Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP82_RS03245 | Genome accession | NZ_CP148225 |
| Coordinates | 623645..623947 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0043 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 618645..628947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP82_RS03220 (WHP82_03220) | rpsR | 619008..619268 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP82_RS03225 (WHP82_03225) | lon | 619328..621703 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP82_RS03230 (WHP82_03230) | - | 621720..622367 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP82_RS03235 (WHP82_03235) | fliW | 622528..622917 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP82_RS03240 (WHP82_03240) | proC | 622917..623648 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP82_RS03245 (WHP82_03245) | ctsT | 623645..623947 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP82_RS03250 (WHP82_03250) | - | 623944..624606 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP82_RS03255 (WHP82_03255) | - | 624603..625055 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP82_RS03260 (WHP82_03260) | hemD | 625052..625681 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP82_RS03265 (WHP82_03265) | thiE | 625659..626291 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP82_RS03270 (WHP82_03270) | thiD | 626281..627093 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP82_RS03275 (WHP82_03275) | - | 627090..627776 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP82_RS03280 (WHP82_03280) | - | 627773..628534 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953011 WHP82_RS03245 WP_002853046.1 623645..623947(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0043]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953011 WHP82_RS03245 WP_002853046.1 623645..623947(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0043]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |