Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP40_RS05345 | Genome accession | NZ_CP148223 |
| Coordinates | 1036003..1036305 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0045 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1031003..1041305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP40_RS05310 (WHP40_05310) | - | 1031416..1032177 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| WHP40_RS05315 (WHP40_05315) | - | 1032174..1032860 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP40_RS05320 (WHP40_05320) | thiD | 1032857..1033669 (+) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP40_RS05325 (WHP40_05325) | thiE | 1033659..1034291 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP40_RS05330 (WHP40_05330) | hemD | 1034269..1034898 (+) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP40_RS05335 (WHP40_05335) | - | 1034895..1035347 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP40_RS05340 (WHP40_05340) | - | 1035344..1036006 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP40_RS05345 (WHP40_05345) | ctsT | 1036003..1036305 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP40_RS05350 (WHP40_05350) | proC | 1036302..1037033 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP40_RS05355 (WHP40_05355) | fliW | 1037033..1037422 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP40_RS05360 (WHP40_05360) | - | 1037583..1038230 (+) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP40_RS05365 (WHP40_05365) | lon | 1038247..1040622 (+) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP40_RS05370 (WHP40_05370) | rpsR | 1040682..1040942 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953000 WHP40_RS05345 WP_002853046.1 1036003..1036305(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0045]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953000 WHP40_RS05345 WP_002853046.1 1036003..1036305(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0045]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |