Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP87_RS06080 | Genome accession | NZ_CP148222 |
| Coordinates | 1183700..1184002 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0047 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1178700..1189002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP87_RS06055 (WHP87_06055) | rpsR | 1179063..1179323 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP87_RS06060 (WHP87_06060) | lon | 1179383..1181758 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP87_RS06065 (WHP87_06065) | - | 1181775..1182422 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP87_RS06070 (WHP87_06070) | fliW | 1182583..1182972 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP87_RS06075 (WHP87_06075) | proC | 1182972..1183703 (+) | 732 | WP_060816226.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP87_RS06080 (WHP87_06080) | ctsT | 1183700..1184002 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP87_RS06085 (WHP87_06085) | - | 1183999..1184661 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP87_RS06090 (WHP87_06090) | - | 1184658..1185110 (+) | 453 | WP_002919943.1 | hypothetical protein | - |
| WHP87_RS06095 (WHP87_06095) | hemD | 1185107..1185736 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| WHP87_RS06100 (WHP87_06100) | thiE | 1185714..1186346 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP87_RS06105 (WHP87_06105) | thiD | 1186336..1187148 (-) | 813 | WP_002919944.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP87_RS06110 (WHP87_06110) | - | 1187145..1187831 (-) | 687 | WP_100623923.1 | endonuclease III domain-containing protein | - |
| WHP87_RS06115 (WHP87_06115) | - | 1187828..1188589 (-) | 762 | WP_002867190.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952962 WHP87_RS06080 WP_002853046.1 1183700..1184002(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0047]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952962 WHP87_RS06080 WP_002853046.1 1183700..1184002(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0047]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |