Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WHP59_RS07710 Genome accession   NZ_CP148219
Coordinates   1512322..1513506 (-) Length   394 a.a.
NCBI ID   WP_002871988.1    Uniprot ID   A0A381CRB9
Organism   Campylobacter jejuni strain Z1323CCJ0054     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1507322..1518506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP59_RS07685 (WHP59_07685) fliL 1508471..1509007 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  WHP59_RS07690 (WHP59_07690) acpS 1509007..1509354 (+) 348 WP_002825806.1 holo-ACP synthase -
  WHP59_RS07695 (WHP59_07695) - 1509355..1509774 (-) 420 WP_002780440.1 hypothetical protein -
  WHP59_RS07700 (WHP59_07700) - 1509771..1511132 (-) 1362 WP_032582304.1 cytochrome P450 -
  WHP59_RS07705 (WHP59_07705) - 1511129..1512250 (-) 1122 WP_057032793.1 hypothetical protein -
  WHP59_RS07710 (WHP59_07710) kpsS 1512322..1513506 (-) 1185 WP_002871988.1 capsule polysaccharide modification protein KpsS Regulator
  WHP59_RS07715 (WHP59_07715) kpsC 1513503..1515572 (-) 2070 WP_002896849.1 capsular polysaccharide biosynthesis protein -
  WHP59_RS07720 (WHP59_07720) cysC 1515569..1516081 (-) 513 WP_002871990.1 cytidine diphosphoramidate kinase -
  WHP59_RS07725 (WHP59_07725) - 1516071..1516832 (-) 762 WP_002871991.1 CTP:phosphoglutamine cytidylyltransferase -
  WHP59_RS07730 (WHP59_07730) - 1516834..1517436 (-) 603 WP_002825815.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46851.51 Da        Isoelectric Point: 9.9073

>NTDB_id=952890 WHP59_RS07710 WP_002871988.1 1512322..1513506(-) (kpsS) [Campylobacter jejuni strain Z1323CCJ0054]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=952890 WHP59_RS07710 WP_002871988.1 1512322..1513506(-) (kpsS) [Campylobacter jejuni strain Z1323CCJ0054]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGTGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A381CRB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.239

100

0.992