Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP61_RS08295 | Genome accession | NZ_CP148214 |
| Coordinates | 1550583..1550885 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0059 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1545583..1555885
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP61_RS08270 (WHP61_08270) | rpsR | 1545945..1546205 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP61_RS08275 (WHP61_08275) | lon | 1546266..1548641 (-) | 2376 | WP_070289967.1 | endopeptidase La | - |
| WHP61_RS08280 (WHP61_08280) | - | 1548658..1549305 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| WHP61_RS08285 (WHP61_08285) | fliW | 1549466..1549855 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP61_RS08290 (WHP61_08290) | proC | 1549855..1550586 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP61_RS08295 (WHP61_08295) | ctsT | 1550583..1550885 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP61_RS08300 (WHP61_08300) | - | 1550882..1551544 (+) | 663 | WP_052773637.1 | hypothetical protein | - |
| WHP61_RS08305 (WHP61_08305) | - | 1551541..1551993 (+) | 453 | WP_011989916.1 | hypothetical protein | - |
| WHP61_RS08310 (WHP61_08310) | hemD | 1551990..1552619 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| WHP61_RS08315 (WHP61_08315) | thiE | 1552597..1553229 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP61_RS08320 (WHP61_08320) | thiD | 1553219..1554031 (-) | 813 | WP_038816794.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP61_RS08325 (WHP61_08325) | - | 1554028..1554714 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP61_RS08330 (WHP61_08330) | - | 1554711..1555472 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952810 WHP61_RS08295 WP_002853046.1 1550583..1550885(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0059]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952810 WHP61_RS08295 WP_002853046.1 1550583..1550885(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0059]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |