Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ12_RS00645 | Genome accession | NZ_CP148213 |
| Coordinates | 113607..113909 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0062 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 108607..118909
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ12_RS00610 (WHQ12_00610) | - | 109020..109781 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHQ12_RS00615 (WHQ12_00615) | - | 109778..110464 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ12_RS00620 (WHQ12_00620) | thiD | 110461..111273 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ12_RS00625 (WHQ12_00625) | thiE | 111263..111895 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ12_RS00630 (WHQ12_00630) | hemD | 111873..112502 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHQ12_RS00635 (WHQ12_00635) | - | 112499..112951 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ12_RS00640 (WHQ12_00640) | - | 112948..113610 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHQ12_RS00645 (WHQ12_00645) | ctsT | 113607..113909 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ12_RS00650 (WHQ12_00650) | proC | 113906..114637 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ12_RS00655 (WHQ12_00655) | fliW | 114637..115026 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ12_RS00660 (WHQ12_00660) | - | 115187..115834 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHQ12_RS00665 (WHQ12_00665) | lon | 115851..118226 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ12_RS00670 (WHQ12_00670) | rpsR | 118286..118546 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952763 WHQ12_RS00645 WP_002853046.1 113607..113909(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0062]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952763 WHQ12_RS00645 WP_002853046.1 113607..113909(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0062]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |