Detailed information NTG0952761

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHQ12_RS00305
• Genome accession: NZ_CP148213
• Coordinates: 43298..44248 (-)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0062
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 38298..49248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ12_RS00270 (WHQ12_00270)	ccoS	38486..38692 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHQ12_RS00275 (WHQ12_00275)	-	38715..39017 (-)	303	WP_002852762.1	cytochrome c	-
WHQ12_RS00280 (WHQ12_00280)	gmhB	39098..39659 (+)	562	Protein_55	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHQ12_RS00285 (WHQ12_00285)	rfaD	39660..40613 (+)	954	WP_234728994.1	ADP-glyceromanno-heptose 6-epimerase	-
WHQ12_RS00290 (WHQ12_00290)	rfaE1	40606..41991 (+)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHQ12_RS00295 (WHQ12_00295)	gmhA	41988..42548 (+)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
WHQ12_RS00300 (WHQ12_00300)	-	42548..43312 (+)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
WHQ12_RS00305 (WHQ12_00305)	waaF	43298..44248 (-)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
WHQ12_RS00310 (WHQ12_00310)	-	44307..45128 (+)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
WHQ12_RS00315 (WHQ12_00315)	-	45199..46155 (+)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
WHQ12_RS00320 (WHQ12_00320)	-	46161..47462 (+)	1302	WP_338851171.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHQ12_RS00325 (WHQ12_00325)	galE	47459..48433 (+)	975	WP_146263329.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=952761 WHQ12_RS00305 WP_002867402.1 43298..44248(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0062]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=952761 WHQ12_RS00305 WP_002867402.1 43298..44248(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0062]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918