Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP71_RS03570 | Genome accession | NZ_CP148210 |
| Coordinates | 685189..685491 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0063 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 680189..690491
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP71_RS03535 (WHP71_03535) | - | 680602..681363 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHP71_RS03540 (WHP71_03540) | - | 681360..682046 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP71_RS03545 (WHP71_03545) | thiD | 682043..682855 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP71_RS03550 (WHP71_03550) | thiE | 682845..683477 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP71_RS03555 (WHP71_03555) | hemD | 683455..684084 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHP71_RS03560 (WHP71_03560) | - | 684081..684533 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP71_RS03565 (WHP71_03565) | - | 684530..685192 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHP71_RS03570 (WHP71_03570) | ctsT | 685189..685491 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP71_RS03575 (WHP71_03575) | proC | 685488..686219 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP71_RS03580 (WHP71_03580) | fliW | 686219..686608 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP71_RS03585 (WHP71_03585) | - | 686769..687416 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHP71_RS03590 (WHP71_03590) | lon | 687433..689808 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP71_RS03595 (WHP71_03595) | rpsR | 689868..690128 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952750 WHP71_RS03570 WP_002853046.1 685189..685491(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0063]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952750 WHP71_RS03570 WP_002853046.1 685189..685491(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0063]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |