Detailed information NTG0952748

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP71_RS03230
• Genome accession: NZ_CP148210
• Coordinates: 614880..615830 (-)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0063
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 609880..620830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP71_RS03195 (WHP71_03195)	ccoS	610068..610274 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHP71_RS03200 (WHP71_03200)	-	610297..610599 (-)	303	WP_002852762.1	cytochrome c	-
WHP71_RS03205 (WHP71_03205)	gmhB	610680..611241 (+)	562	Protein_616	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP71_RS03210 (WHP71_03210)	rfaD	611242..612195 (+)	954	WP_234728994.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP71_RS03215 (WHP71_03215)	rfaE1	612188..613573 (+)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP71_RS03220 (WHP71_03220)	gmhA	613570..614130 (+)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
WHP71_RS03225 (WHP71_03225)	-	614130..614894 (+)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
WHP71_RS03230 (WHP71_03230)	waaF	614880..615830 (-)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP71_RS03235 (WHP71_03235)	-	615889..616710 (+)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
WHP71_RS03240 (WHP71_03240)	-	616781..617737 (+)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
WHP71_RS03245 (WHP71_03245)	-	617743..619044 (+)	1302	WP_338851171.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHP71_RS03250 (WHP71_03250)	galE	619041..620015 (+)	975	WP_146263329.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=952748 WHP71_RS03230 WP_002867402.1 614880..615830(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0063]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=952748 WHP71_RS03230 WP_002867402.1 614880..615830(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0063]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918