Detailed information NTG0952720

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FR_RS05675
• Genome accession: NZ_CP172379
• Coordinates: 1081334..1082293 (+)
• Length: 319 a.a.
• NCBI ID: WP_004308620.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH013
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1076334..1087293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FR_RS05650 (ACH6FR_05650)	-	1076682..1077705 (-)	1024	Protein_1092	hypothetical protein	-
ACH6FR_RS05655 (ACH6FR_05655)	-	1077776..1078549 (+)	774	WP_002869611.1	glycosyltransferase family 25 protein	-
ACH6FR_RS05660 (ACH6FR_05660)	wlaTB	1078542..1079498 (+)	957	WP_002869613.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
ACH6FR_RS05665 (ACH6FR_05665)	yibB	1079495..1080454 (+)	960	WP_002869615.1	protein YibB	-
ACH6FR_RS05670 (ACH6FR_05670)	waaV	1080457..1081275 (-)	819	WP_395941074.1	glycosyltransferase family 2 protein	-
ACH6FR_RS05675 (ACH6FR_05675)	waaF	1081334..1082293 (+)	960	WP_004308620.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FR_RS05680 (ACH6FR_05680)	gmhA	1082274..1082834 (-)	561	WP_002869619.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FR_RS05685 (ACH6FR_05685)	rfaE1	1082831..1084216 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FR_RS05690 (ACH6FR_05690)	rfaD	1084209..1085162 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FR_RS05695 (ACH6FR_05695)	gmhB	1085163..1085724 (-)	562	Protein_1101	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FR_RS05700 (ACH6FR_05700)	-	1085805..1086107 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FR_RS05705 (ACH6FR_05705)	ccoS	1086130..1086336 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36751.47 Da
• Isoelectric Point: 10.3520

>NTDB_id=952720 ACH6FR_RS05675 WP_004308620.1 1081334..1082293(+) (waaF) [Campylobacter jejuni strain YH013]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFNQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEAKNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=952720 ACH6FR_RS05675 WP_004308620.1 1081334..1082293(+) (waaF) [Campylobacter jejuni strain YH013]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAACCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAAAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.671	100	0.947