Detailed information NTG0952681

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP58_RS01235
• Genome accession: NZ_CP148206
• Coordinates: 230861..231820 (-)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0066
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 225861..236820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP58_RS01205 (WHP58_01205)	ccoS	226818..227024 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHP58_RS01210 (WHP58_01210)	-	227047..227349 (-)	303	WP_002852762.1	cytochrome c	-
WHP58_RS01215 (WHP58_01215)	gmhB	227431..227991 (+)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP58_RS01220 (WHP58_01220)	rfaD	227992..228945 (+)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP58_RS01225 (WHP58_01225)	rfaE1	228938..230323 (+)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP58_RS01230 (WHP58_01230)	gmhA	230320..230880 (+)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WHP58_RS01235 (WHP58_01235)	waaF	230861..231820 (-)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP58_RS01240 (WHP58_01240)	waaV	231879..232703 (+)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WHP58_RS01245 (WHP58_01245)	-	232687..233537 (+)	851	Protein_245	glycosyltransferase	-
WHP58_RS01250 (WHP58_01250)	-	233532..234194 (-)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WHP58_RS01255 (WHP58_01255)	-	234276..235142 (-)	867	Protein_247	beta-1,4-N-acetylgalactosaminyltransferase	-
WHP58_RS01260 (WHP58_01260)	neuC	235139..236254 (-)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=952681 WHP58_RS01235 WP_002875425.1 230861..231820(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0066]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=952681 WHP58_RS01235 WP_002875425.1 230861..231820(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0066]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1