Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   WHP75_RS03515 Genome accession   NZ_CP148203
Coordinates   661175..661612 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain Z1323CCJ0069     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 656175..666612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP75_RS03485 (WHP75_03485) - 656794..657267 (+) 474 WP_317948528.1 hypothetical protein -
  WHP75_RS03490 (WHP75_03490) - 657251..657811 (+) 561 WP_338877734.1 hypothetical protein -
  WHP75_RS03495 (WHP75_03495) - 657843..658487 (+) 645 WP_223212446.1 DUF4118 domain-containing protein -
  WHP75_RS03500 (WHP75_03500) uvrB 658589..660562 (-) 1974 WP_070289748.1 excinuclease ABC subunit UvrB -
  WHP75_RS03505 (WHP75_03505) - 660716..660946 (+) 231 WP_002852327.1 hypothetical protein -
  WHP75_RS03510 (WHP75_03510) - 660936..661178 (+) 243 WP_002854947.1 hypothetical protein -
  WHP75_RS03515 (WHP75_03515) Cj0683 661175..661612 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  WHP75_RS03520 (WHP75_03520) priA 661594..663447 (+) 1854 WP_002872608.1 primosomal protein N' -
  WHP75_RS03525 (WHP75_03525) cipA 663457..664852 (-) 1396 Protein_683 DUF2972 domain-containing protein -
  WHP75_RS03530 (WHP75_03530) ispG 664998..666071 (+) 1074 WP_070289746.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=952658 WHP75_RS03515 WP_002852324.1 661175..661612(+) (Cj0683) [Campylobacter jejuni strain Z1323CCJ0069]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=952658 WHP75_RS03515 WP_002852324.1 661175..661612(+) (Cj0683) [Campylobacter jejuni strain Z1323CCJ0069]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1