Detailed information NTG0952627

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FX_RS05630
• Genome accession: NZ_CP172375
• Coordinates: 1088035..1088994 (+)
• Length: 319 a.a.
• NCBI ID: WP_002852903.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH017
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1083035..1093994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FX_RS05600 (ACH6FX_05600)	neuB	1083538..1084578 (+)	1041	WP_002894656.1	N-acetylneuraminate synthase	-
ACH6FX_RS05605 (ACH6FX_05605)	neuC	1084575..1085693 (+)	1119	WP_395766296.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FX_RS05610 (ACH6FX_05610)	-	1085690..1086355 (+)	666	WP_002894653.1	cytidylyltransferase domain-containing protein	-
ACH6FX_RS05615 (ACH6FX_05615)	-	1086343..1086516 (+)	174	WP_002896733.1	hypothetical protein	-
ACH6FX_RS05620 (ACH6FX_05620)	-	1086558..1087172 (+)	615	WP_002926085.1	CatB-related O-acetyltransferase	-
ACH6FX_RS05625 (ACH6FX_05625)	waaV	1087164..1087976 (-)	813	WP_002878817.1	glycosyltransferase family 2 protein	-
ACH6FX_RS05630 (ACH6FX_05630)	waaF	1088035..1088994 (+)	960	WP_002852903.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FX_RS05635 (ACH6FX_05635)	gmhA	1088975..1089535 (-)	561	WP_002852775.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FX_RS05640 (ACH6FX_05640)	rfaE1	1089532..1090917 (-)	1386	WP_002852777.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FX_RS05645 (ACH6FX_05645)	rfaD	1090910..1091863 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FX_RS05650 (ACH6FX_05650)	gmhB	1091864..1092424 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FX_RS05655 (ACH6FX_05655)	-	1092506..1092808 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FX_RS05660 (ACH6FX_05660)	ccoS	1092831..1093037 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.44 Da
• Isoelectric Point: 10.4054

>NTDB_id=952627 ACH6FX_RS05630 WP_002852903.1 1088035..1088994(+) (waaF) [Campylobacter jejuni strain YH017]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=952627 ACH6FX_RS05630 WP_002852903.1 1088035..1088994(+) (waaF) [Campylobacter jejuni strain YH017]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95