Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | WHP47_RS07170 | Genome accession | NZ_CP148199 |
| Coordinates | 1355955..1356923 (+) | Length | 322 a.a. |
| NCBI ID | WP_002872671.1 | Uniprot ID | Q0P8Q7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0072 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1322293..1355094 | 1355955..1356923 | flank | 861 |
Gene organization within MGE regions
Location: 1322293..1356923
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP47_RS06905 (WHP47_06905) | - | 1322293..1322982 (-) | 690 | WP_257070182.1 | XRE family transcriptional regulator | - |
| WHP47_RS06910 (WHP47_06910) | - | 1323173..1323487 (-) | 315 | WP_002865557.1 | hypothetical protein | - |
| WHP47_RS06915 (WHP47_06915) | - | 1323532..1323723 (+) | 192 | WP_338878052.1 | hypothetical protein | - |
| WHP47_RS06920 (WHP47_06920) | - | 1323724..1325892 (+) | 2169 | WP_338909842.1 | Mu transposase C-terminal domain-containing protein | - |
| WHP47_RS06925 (WHP47_06925) | - | 1325981..1326838 (+) | 858 | WP_002790751.1 | AAA family ATPase | - |
| WHP47_RS06930 (WHP47_06930) | - | 1326835..1327026 (+) | 192 | WP_002791422.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| WHP47_RS06935 (WHP47_06935) | - | 1327023..1327208 (+) | 186 | WP_002824157.1 | hypothetical protein | - |
| WHP47_RS06940 (WHP47_06940) | - | 1327264..1327695 (+) | 432 | WP_002865075.1 | SA1788 family PVL leukocidin-associated protein | - |
| WHP47_RS06945 (WHP47_06945) | - | 1327769..1328107 (+) | 339 | WP_052777360.1 | DUF4406 domain-containing protein | - |
| WHP47_RS06950 (WHP47_06950) | - | 1328303..1328788 (+) | 486 | WP_338909843.1 | host-nuclease inhibitor Gam family protein | - |
| WHP47_RS06955 (WHP47_06955) | - | 1328887..1329126 (+) | 240 | WP_002875726.1 | hypothetical protein | - |
| WHP47_RS06960 (WHP47_06960) | - | 1329267..1329905 (+) | 639 | WP_002875725.1 | BRO family protein | - |
| WHP47_RS06965 (WHP47_06965) | - | 1329902..1330096 (+) | 195 | WP_002875724.1 | hypothetical protein | - |
| WHP47_RS06970 (WHP47_06970) | - | 1330134..1330571 (+) | 438 | WP_070276125.1 | hypothetical protein | - |
| WHP47_RS06975 (WHP47_06975) | - | 1330614..1330805 (+) | 192 | WP_002790256.1 | hypothetical protein | - |
| WHP47_RS06980 (WHP47_06980) | - | 1330792..1331271 (+) | 480 | WP_043011864.1 | phage virion morphogenesis protein | - |
| WHP47_RS06985 (WHP47_06985) | - | 1331410..1332543 (-) | 1134 | WP_002870187.1 | phage minor head protein | - |
| WHP47_RS06990 (WHP47_06990) | - | 1332536..1333918 (-) | 1383 | WP_057980531.1 | DUF935 family protein | - |
| WHP47_RS06995 (WHP47_06995) | terL | 1333915..1335441 (-) | 1527 | WP_057980530.1 | phage terminase large subunit | - |
| WHP47_RS07000 (WHP47_07000) | - | 1335531..1335845 (-) | 315 | WP_002790261.1 | phage holin family protein | - |
| WHP47_RS07005 (WHP47_07005) | - | 1335848..1335970 (-) | 123 | WP_002784494.1 | hypothetical protein | - |
| WHP47_RS07010 (WHP47_07010) | - | 1335957..1336205 (-) | 249 | WP_002784496.1 | hypothetical protein | - |
| WHP47_RS07015 (WHP47_07015) | - | 1336202..1336543 (-) | 342 | WP_002854893.1 | hypothetical protein | - |
| WHP47_RS07020 (WHP47_07020) | - | 1336554..1336943 (-) | 390 | WP_052798388.1 | D-Ala-D-Ala carboxypeptidase family metallohydrolase | - |
| WHP47_RS07025 (WHP47_07025) | - | 1336933..1337298 (-) | 366 | WP_002790266.1 | hypothetical protein | - |
| WHP47_RS07030 (WHP47_07030) | - | 1337428..1337781 (-) | 354 | WP_002790896.1 | hypothetical protein | - |
| WHP47_RS07035 (WHP47_07035) | - | 1337778..1338131 (-) | 354 | WP_338909847.1 | hypothetical protein | - |
| WHP47_RS07040 (WHP47_07040) | - | 1338131..1339018 (-) | 888 | WP_002790002.1 | Mu-like prophage major head subunit gpT family protein | - |
| WHP47_RS07045 (WHP47_07045) | - | 1339018..1340058 (-) | 1041 | WP_063674717.1 | phage protease | - |
| WHP47_RS07050 (WHP47_07050) | - | 1340189..1340653 (+) | 465 | WP_002865847.1 | DUF1804 family protein | - |
| WHP47_RS07055 (WHP47_07055) | - | 1340650..1341282 (+) | 633 | WP_002876443.1 | phage baseplate assembly protein V | - |
| WHP47_RS07060 (WHP47_07060) | - | 1341291..1341482 (+) | 192 | WP_002795238.1 | hypothetical protein | - |
| WHP47_RS07065 (WHP47_07065) | - | 1341479..1341769 (+) | 291 | WP_002795239.1 | GPW/gp25 family protein | - |
| WHP47_RS07070 (WHP47_07070) | - | 1341766..1342932 (+) | 1167 | WP_338909848.1 | baseplate J/gp47 family protein | - |
| WHP47_RS07075 (WHP47_07075) | - | 1343030..1343650 (+) | 621 | WP_338909850.1 | phage tail protein I | - |
| WHP47_RS07080 (WHP47_07080) | - | 1343650..1344681 (+) | 1032 | WP_032584249.1 | phage tail protein | - |
| WHP47_RS07085 (WHP47_07085) | - | 1344706..1345212 (+) | 507 | WP_338909852.1 | hypothetical protein | - |
| WHP47_RS07090 (WHP47_07090) | - | 1345209..1345595 (+) | 387 | WP_338909853.1 | DUF1353 domain-containing protein | - |
| WHP47_RS07095 (WHP47_07095) | - | 1345592..1346599 (+) | 1008 | WP_338909854.1 | hypothetical protein | - |
| WHP47_RS07100 (WHP47_07100) | - | 1346618..1347808 (+) | 1191 | WP_265604847.1 | phage tail sheath family protein | - |
| WHP47_RS07105 (WHP47_07105) | - | 1347931..1348446 (+) | 516 | WP_002865794.1 | phage major tail tube protein | - |
| WHP47_RS07110 (WHP47_07110) | - | 1348457..1348693 (+) | 237 | WP_057030919.1 | phage tail assembly protein | - |
| WHP47_RS07115 (WHP47_07115) | - | 1348801..1349031 (-) | 231 | WP_002789978.1 | hypothetical protein | - |
| WHP47_RS07120 (WHP47_07120) | - | 1349061..1351025 (+) | 1965 | WP_265604370.1 | phage tail tape measure protein | - |
| WHP47_RS07125 (WHP47_07125) | - | 1351027..1351401 (+) | 375 | WP_002923429.1 | phage tail protein | - |
| WHP47_RS07130 (WHP47_07130) | - | 1351394..1351585 (+) | 192 | WP_002789964.1 | tail protein X | - |
| WHP47_RS07135 (WHP47_07135) | - | 1351579..1352547 (+) | 969 | WP_002865687.1 | phage tail protein | - |
| WHP47_RS07140 (WHP47_07140) | - | 1352649..1353464 (+) | 816 | WP_265604846.1 | DNA adenine methylase | - |
| WHP47_RS07145 (WHP47_07145) | - | 1353494..1353781 (-) | 288 | WP_002865266.1 | hypothetical protein | - |
| WHP47_RS07150 (WHP47_07150) | - | 1353861..1354055 (-) | 195 | WP_002843339.1 | hypothetical protein | - |
| WHP47_RS07155 (WHP47_07155) | - | 1354065..1354385 (-) | 321 | WP_002865000.1 | hypothetical protein | - |
| WHP47_RS07160 (WHP47_07160) | - | 1354465..1355094 (-) | 630 | WP_126417986.1 | LexA family transcriptional regulator | - |
| WHP47_RS07165 (WHP47_07165) | - | 1355273..1355869 (+) | 597 | Protein_1392 | phospholipase A | - |
| WHP47_RS07170 (WHP47_07170) | ceuB | 1355955..1356923 (+) | 969 | WP_002872671.1 | ABC transporter permease | Machinery gene |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 35469.40 Da Isoelectric Point: 9.6678
>NTDB_id=952614 WHP47_RS07170 WP_002872671.1 1355955..1356923(+) (ceuB) [Campylobacter jejuni strain Z1323CCJ0072]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA
Nucleotide
Download Length: 969 bp
>NTDB_id=952614 WHP47_RS07170 WP_002872671.1 1355955..1356923(+) (ceuB) [Campylobacter jejuni strain Z1323CCJ0072]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
99.068 |
100 |
0.991 |