Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP85_RS06650 | Genome accession | NZ_CP148197 |
| Coordinates | 1266054..1266356 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0073 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1261054..1271356
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP85_RS06625 (WHP85_06625) | rpsR | 1261417..1261677 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP85_RS06630 (WHP85_06630) | lon | 1261737..1264112 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP85_RS06635 (WHP85_06635) | - | 1264129..1264776 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP85_RS06640 (WHP85_06640) | fliW | 1264937..1265326 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP85_RS06645 (WHP85_06645) | proC | 1265326..1266057 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP85_RS06650 (WHP85_06650) | ctsT | 1266054..1266356 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP85_RS06655 (WHP85_06655) | - | 1266353..1267015 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP85_RS06660 (WHP85_06660) | - | 1267012..1267464 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP85_RS06665 (WHP85_06665) | hemD | 1267461..1268090 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WHP85_RS06670 (WHP85_06670) | thiE | 1268068..1268700 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP85_RS06675 (WHP85_06675) | thiD | 1268690..1269502 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP85_RS06680 (WHP85_06680) | - | 1269499..1270185 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP85_RS06685 (WHP85_06685) | - | 1270182..1270943 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952587 WHP85_RS06650 WP_002853046.1 1266054..1266356(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0073]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952587 WHP85_RS06650 WP_002853046.1 1266054..1266356(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0073]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |